PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Roff5661210487380 Rosmarinic Acid C4H medium pass
Roff5661210487390 Rosmarinic Acid C4H low borderline
Roff5851610492350 Rosmarinic Acid C4H medium pass
Roff5851620492390 Rosmarinic Acid C4H medium pass
Roff5851620492400 Rosmarinic Acid C4H medium pass
Roff5851630492410 Rosmarinic Acid C4H medium pass
Roff5851640492430 Rosmarinic Acid C4H medium pass
Roff5871460492890 Rosmarinic Acid C4H low borderline
Roff5871460492900 Rosmarinic Acid C4H low borderline
Roff5871470492910 Rosmarinic Acid C4H low borderline
Roff5871470492920 Rosmarinic Acid C4H low borderline
Roff5871510492950 Rosmarinic Acid C4H low borderline
Roff5871670492970 Rosmarinic Acid C4H low borderline
Roff8110495070 Rosmarinic Acid C4H medium pass
Roff8110495380 Rosmarinic Acid C4H medium pass
Roff8110495390 Rosmarinic Acid C4H medium pass
Roff8110495540 Rosmarinic Acid C4H medium pass
Roff8110495550 Rosmarinic Acid C4H medium pass
Roff8110498870 Rosmarinic Acid C4H low borderline
Roff8300509670 Rosmarinic Acid C4H low borderline
Roff8300513680 Rosmarinic Acid C4H low borderline
Roff10150002540 Rosmarinic Acid CPR medium pass
Roff10150002550 Rosmarinic Acid CPR medium pass
Roff10420054840 Rosmarinic Acid CPR low borderline
Roff10510068700 Rosmarinic Acid CPR medium pass
Roff11030087370 Rosmarinic Acid CPR low borderline
Roff11030087380 Rosmarinic Acid CPR low borderline
Roff14530189940 Rosmarinic Acid CPR medium pass
Roff18930244830 Rosmarinic Acid CPR medium pass
Roff21720290080 Rosmarinic Acid CPR medium pass
Roff3702770415610 Rosmarinic Acid CPR medium pass
Roff3740830421060 Rosmarinic Acid CPR low borderline
Roff3836470439410 Rosmarinic Acid CPR medium pass
Roff3836470439420 Rosmarinic Acid CPR medium pass
Roff3897040461790 Rosmarinic Acid CPR medium pass
Roff11530116960 Rosmarinic Acid HPPR medium pass
Roff11530116970 Rosmarinic Acid HPPR medium pass
Roff11860123140 Rosmarinic Acid HPPR medium pass
Roff20320260190 Rosmarinic Acid HPPR medium pass
Roff21280277470 Rosmarinic Acid HPPR medium pass
Roff3064500376800 Rosmarinic Acid HPPR medium pass
Roff3592630405690 Rosmarinic Acid HPPR medium pass
Roff3592630405700 Rosmarinic Acid HPPR medium pass
Roff3592630405710 Rosmarinic Acid HPPR medium pass
Roff3699100414960 Rosmarinic Acid HPPR medium pass
Roff3833500438580 Rosmarinic Acid HPPR medium pass
Roff11520100730 Rosmarinic Acid PAL high pass
Roff12670144380 Rosmarinic Acid PAL low borderline
Roff16590215870 Rosmarinic Acid PAL high pass
Roff19530253080 Rosmarinic Acid PAL high pass