PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status
Svir01G0006310.1 Phenylpropanoid CAD medium pass
Svir01G0017110.1 Phenylpropanoid CAD low borderline
Svir01G0017120.1 Phenylpropanoid CAD low borderline
Svir01G0022850.1 Phenylpropanoid CAD low borderline
Svir01G0040620.1 Phenylpropanoid CAD low borderline
Svir02G0014970.1 Phenylpropanoid CAD medium borderline
Svir02G0014970.2 Phenylpropanoid CAD medium borderline
Svir02G0016430.1 Phenylpropanoid CAD low borderline
Svir02G0022580.1 Phenylpropanoid CAD medium pass
Svir02G0022590.1 Phenylpropanoid CAD medium pass
Svir02G0022620.1 Phenylpropanoid CAD medium pass
Svir02G0022620.2 Phenylpropanoid CAD medium pass
Svir02G0022640.1 Phenylpropanoid CAD medium pass
Svir03G0007640.1 Phenylpropanoid CAD low borderline
Svir03G0007640.2 Phenylpropanoid CAD low borderline
Svir03G0007650.1 Phenylpropanoid CAD low borderline
Svir03G0007650.2 Phenylpropanoid CAD low borderline
Svir03G0007670.1 Phenylpropanoid CAD low borderline
Svir04G0023200.1 Phenylpropanoid CAD medium pass
Svir04G0029350.1 Phenylpropanoid CAD medium borderline
Svir04G0029350.2 Phenylpropanoid CAD medium borderline
Svir05G0019420.1 Phenylpropanoid CAD medium borderline
Svir05G0019440.1 Phenylpropanoid CAD medium borderline
Svir05G0019440.2 Phenylpropanoid CAD medium borderline
Svir05G0034180.1 Phenylpropanoid CAD low borderline
Svir05G0040250.1 Phenylpropanoid CAD medium borderline
Svir05G0040270.1 Phenylpropanoid CAD medium borderline
Svir05G0043150.1 Phenylpropanoid CAD medium pass
Svir06G0000900.1 Phenylpropanoid CAD low borderline
Svir06G0000900.2 Phenylpropanoid CAD low borderline
Svir06G0002770.1 Phenylpropanoid CAD medium pass
Svir06G0002770.2 Phenylpropanoid CAD medium pass
Svir06G0002830.1 Phenylpropanoid CAD medium pass
Svir06G0002830.2 Phenylpropanoid CAD medium pass
Svir06G0002830.3 Phenylpropanoid CAD medium pass
Svir06G0005430.1 Phenylpropanoid CAD low borderline
Svir06G0005440.1 Phenylpropanoid CAD low borderline
Svir06G0005480.1 Phenylpropanoid CAD low borderline
Svir06G0007620.1 Phenylpropanoid CAD low borderline
Svir06G0007810.1 Phenylpropanoid CAD low borderline
Svir06G0007820.1 Phenylpropanoid CAD low borderline
Svir06G0007820.2 Phenylpropanoid CAD low borderline
Svir06G0007850.1 Phenylpropanoid CAD low borderline
Svir06G0008040.1 Phenylpropanoid CAD low borderline
Svir06G0009990.1 Phenylpropanoid CAD low borderline
Svir07G0003320.1 Phenylpropanoid CAD medium pass
Svir07G0005950.1 Phenylpropanoid CAD medium pass
Svir07G0007620.1 Phenylpropanoid CAD low borderline
Svir07G0007620.2 Phenylpropanoid CAD low borderline
Svir07G0026350.1 Phenylpropanoid CAD low borderline