PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
Svir01G0003800.1 Flavonoid FNS medium borderline
Svir01G0003800.2 Flavonoid FNS medium borderline
Svir01G0003800.3 Flavonoid FNS medium borderline
Svir01G0003800.4 Flavonoid FNS medium borderline
Svir01G0003800.5 Flavonoid FNS medium borderline
Svir01G0003800.6 Flavonoid FNS medium borderline
Svir01G0003800.7 Flavonoid FNS medium borderline
Svir01G0003800.8 Flavonoid FNS medium borderline
Svir01G0003800.9 Flavonoid FNS medium borderline
Svir01G0007680.1 Flavonoid FNS medium borderline
Svir01G0007680.2 Flavonoid FNS medium borderline
Svir01G0030270.1 Flavonoid FNS medium borderline
Svir01G0030270.2 Flavonoid FNS medium borderline
Svir02G0021100.1 Flavonoid FNS low borderline
Svir03G0019870.1 Flavonoid FNS medium borderline
Svir03G0036540.1 Flavonoid FNS medium borderline
Svir04G0026830.1 Flavonoid FNS medium borderline
Svir04G0026830.2 Flavonoid FNS medium borderline
Svir04G0026830.3 Flavonoid FNS medium borderline
Svir04G0026830.4 Flavonoid FNS medium borderline
Svir05G0001090.1 Flavonoid FNS medium borderline
Svir05G0001100.1 Flavonoid FNS low borderline
Svir05G0001150.1 Flavonoid FNS medium borderline
Svir05G0025710.1 Flavonoid FNS medium borderline
Svir05G0025710.2 Flavonoid FNS medium borderline
Svir05G0050340.1 Flavonoid FNS medium borderline
Svir06G0006020.1 Flavonoid FNS medium borderline
Svir06G0006050.1 Flavonoid FNS medium borderline
Svir06G0020440.1 Flavonoid FNS medium borderline
Svir06G0020460.1 Flavonoid FNS medium borderline
Svir07G0001740.1 Flavonoid FNS medium borderline
Svir07G0023150.1 Flavonoid FNS medium borderline
Svir08G0015870.1 Flavonoid FNS medium borderline
Svir08G0015880.1 Flavonoid FNS medium borderline
Svir08G0017570.1 Flavonoid FNS medium borderline
Svir08G0017580.1 Flavonoid FNS medium borderline
Svir08G0017610.1 Flavonoid FNS medium borderline
Svir08G0017630.1 Flavonoid FNS medium borderline
Svir08G0028730.1 Flavonoid FNS medium borderline
Svir09G0001180.1 Flavonoid FNS medium borderline
Svir09G0002290.1 Flavonoid FNS medium borderline
Svir09G0018950.1 Flavonoid FNS medium borderline