PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status
Svir01G0004680.1 Alkaloid SLS medium borderline
Svir01G0004680.2 Alkaloid SLS medium borderline
Svir01G0007680.1 Alkaloid SLS medium borderline
Svir01G0007680.2 Alkaloid SLS medium borderline
Svir01G0018780.1 Alkaloid SLS medium borderline
Svir01G0029260.1 Alkaloid SLS medium borderline
Svir01G0041580.1 Alkaloid SLS medium borderline
Svir02G0022830.1 Alkaloid SLS medium borderline
Svir02G0045300.1 Alkaloid SLS medium borderline
Svir02G0045320.1 Alkaloid SLS medium borderline
Svir02G0045340.1 Alkaloid SLS medium borderline
Svir02G0046130.1 Alkaloid SLS medium borderline
Svir02G0046270.1 Alkaloid SLS medium borderline
Svir02G0048520.1 Alkaloid SLS medium borderline
Svir02G0048520.2 Alkaloid SLS medium borderline
Svir02G0048520.4 Alkaloid SLS medium borderline
Svir02G0048520.5 Alkaloid SLS medium borderline
Svir03G0022260.1 Alkaloid SLS medium borderline
Svir03G0027330.1 Alkaloid SLS medium borderline
Svir03G0033290.1 Alkaloid SLS medium borderline
Svir04G0002170.1 Alkaloid SLS medium borderline
Svir04G0002170.2 Alkaloid SLS medium borderline
Svir04G0002170.3 Alkaloid SLS medium borderline
Svir04G0002170.4 Alkaloid SLS medium borderline
Svir04G0002170.6 Alkaloid SLS medium borderline
Svir04G0002170.7 Alkaloid SLS medium borderline
Svir04G0002170.8 Alkaloid SLS medium borderline
Svir04G0002180.1 Alkaloid SLS medium borderline
Svir04G0002180.2 Alkaloid SLS medium borderline
Svir04G0003850.1 Alkaloid SLS medium borderline
Svir04G0004660.1 Alkaloid SLS low borderline
Svir04G0025500.1 Alkaloid SLS medium borderline
Svir05G0013200.1 Alkaloid SLS medium borderline
Svir05G0025710.1 Alkaloid SLS medium borderline
Svir05G0025710.2 Alkaloid SLS medium borderline
Svir05G0025720.1 Alkaloid SLS medium borderline
Svir05G0025740.1 Alkaloid SLS medium borderline
Svir05G0025770.1 Alkaloid SLS medium borderline
Svir05G0025780.1 Alkaloid SLS medium borderline
Svir05G0025780.2 Alkaloid SLS medium borderline
Svir05G0025790.1 Alkaloid SLS medium borderline
Svir05G0025830.1 Alkaloid SLS medium borderline
Svir05G0025850.1 Alkaloid SLS medium borderline
Svir05G0025850.2 Alkaloid SLS medium borderline
Svir06G0018130.1 Alkaloid SLS medium borderline
Svir07G0023390.1 Alkaloid SLS medium borderline
Svir07G0023400.1 Alkaloid SLS medium borderline
Svir07G0023570.1 Alkaloid SLS medium borderline
Svir07G0023570.2 Alkaloid SLS medium borderline
Svir07G0023570.3 Alkaloid SLS medium borderline