PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
Svir01G0006520.1 Alkaloid T16H medium borderline
Svir01G0014530.1 Alkaloid T16H medium borderline
Svir01G0017730.1 Alkaloid T16H medium borderline
Svir02G0011820.1 Alkaloid T16H medium borderline
Svir02G0024970.1 Alkaloid T16H low borderline
Svir03G0019890.1 Alkaloid T16H medium borderline
Svir03G0019890.2 Alkaloid T16H medium borderline
Svir03G0019890.3 Alkaloid T16H medium borderline
Svir04G0002170.5 Alkaloid T16H low borderline
Svir04G0022910.1 Alkaloid T16H medium borderline
Svir04G0022970.1 Alkaloid T16H medium borderline
Svir05G0001140.1 Alkaloid T16H medium borderline
Svir05G0005460.1 Alkaloid T16H medium borderline
Svir05G0039650.1 Alkaloid T16H medium borderline
Svir06G0006930.1 Alkaloid T16H medium borderline
Svir06G0008500.1 Alkaloid T16H medium borderline
Svir06G0011490.1 Alkaloid T16H medium borderline
Svir06G0011540.1 Alkaloid T16H low borderline
Svir06G0019960.1 Alkaloid T16H medium borderline
Svir06G0020940.1 Alkaloid T16H medium borderline
Svir06G0027300.1 Alkaloid T16H medium borderline
Svir07G0006450.1 Alkaloid T16H medium borderline
Svir08G0014580.1 Alkaloid T16H medium borderline
Svir08G0015870.1 Alkaloid T16H medium borderline
Svir08G0017610.1 Alkaloid T16H medium borderline
Svir08G0019130.1 Alkaloid T16H low borderline
Svir08G0027270.1 Alkaloid T16H medium borderline
Svir08G0027430.1 Alkaloid T16H medium borderline
Svir08G0027460.1 Alkaloid T16H medium borderline
Svir09G0001260.1 Alkaloid T16H medium borderline
Svir09G0001290.1 Alkaloid T16H medium borderline
Svir09G0014160.1 Alkaloid T16H medium borderline
Svir09G0021270.1 Alkaloid T16H medium borderline
Svir09G0032880.1 Alkaloid T16H medium borderline
Svir09G0043270.1 Alkaloid T16H medium borderline
Svir09G0043360.1 Alkaloid T16H medium borderline
Svir09G0045030.1 Alkaloid T16H medium borderline
Svir09G0045080.1 Alkaloid T16H medium borderline
Svir09G0053410.1 Alkaloid T16H low borderline