PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
Svir01G0000060.1 Alkaloid CODM/T6ODM medium borderline
Svir01G0027340.1 Alkaloid CODM/T6ODM medium borderline
Svir01G0037230.1 Alkaloid CODM/T6ODM medium borderline
Svir02G0005550.1 Alkaloid CODM/T6ODM medium borderline
Svir02G0005550.2 Alkaloid CODM/T6ODM medium borderline
Svir02G0015510.1 Alkaloid CODM/T6ODM medium borderline
Svir02G0024610.1 Alkaloid CODM/T6ODM medium borderline
Svir02G0024610.2 Alkaloid CODM/T6ODM medium borderline
Svir03G0003480.1 Alkaloid CODM/T6ODM medium borderline
Svir03G0005530.3 Alkaloid CODM/T6ODM medium borderline
Svir03G0005530.4 Alkaloid CODM/T6ODM medium borderline
Svir03G0008520.2 Alkaloid CODM/T6ODM medium borderline
Svir03G0010130.1 Alkaloid CODM/T6ODM medium borderline
Svir03G0016300.1 Alkaloid CODM/T6ODM medium borderline
Svir03G0024990.1 Alkaloid CODM/T6ODM medium borderline
Svir03G0024990.2 Alkaloid CODM/T6ODM medium borderline
Svir03G0024990.3 Alkaloid CODM/T6ODM medium borderline
Svir03G0039390.1 Alkaloid CODM/T6ODM medium borderline
Svir04G0001950.1 Alkaloid CODM/T6ODM medium borderline
Svir04G0005920.1 Alkaloid CODM/T6ODM medium borderline
Svir04G0005950.1 Alkaloid CODM/T6ODM medium borderline
Svir04G0006460.1 Alkaloid CODM/T6ODM medium borderline
Svir04G0006890.1 Alkaloid CODM/T6ODM medium borderline
Svir04G0009260.1 Alkaloid CODM/T6ODM medium borderline
Svir04G0012430.1 Alkaloid CODM/T6ODM medium borderline
Svir04G0026670.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0013420.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0013420.2 Alkaloid CODM/T6ODM medium borderline
Svir05G0014000.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0016040.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0017170.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0020470.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0020990.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0028410.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0040560.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0040560.2 Alkaloid CODM/T6ODM medium borderline
Svir05G0040560.3 Alkaloid CODM/T6ODM medium borderline
Svir05G0049220.1 Alkaloid CODM/T6ODM medium borderline
Svir06G0003020.1 Alkaloid CODM/T6ODM medium borderline
Svir06G0003020.2 Alkaloid CODM/T6ODM medium borderline
Svir06G0021470.1 Alkaloid CODM/T6ODM medium borderline
Svir06G0023300.1 Alkaloid CODM/T6ODM low borderline
Svir06G0028460.1 Alkaloid CODM/T6ODM medium borderline
Svir07G0012330.1 Alkaloid CODM/T6ODM medium borderline
Svir07G0019260.1 Alkaloid CODM/T6ODM medium borderline
Svir07G0023810.1 Alkaloid CODM/T6ODM medium borderline
Svir07G0023830.1 Alkaloid CODM/T6ODM medium borderline
Svir07G0030390.1 Alkaloid CODM/T6ODM medium borderline
Svir08G0010410.1 Alkaloid CODM/T6ODM medium borderline
Svir08G0011050.1 Alkaloid CODM/T6ODM medium borderline