PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
Svir01G0000610.1 Alkaloid G8O/G8H medium pass
Svir01G0003590.1 Alkaloid G8O/G8H medium borderline
Svir01G0003600.1 Alkaloid G8O/G8H medium borderline
Svir01G0018730.1 Alkaloid G8O/G8H medium borderline
Svir01G0028390.1 Alkaloid G8O/G8H medium borderline
Svir02G0010860.1 Alkaloid G8O/G8H medium borderline
Svir02G0015950.1 Alkaloid G8O/G8H medium borderline
Svir02G0021850.1 Alkaloid G8O/G8H medium borderline
Svir02G0021890.1 Alkaloid G8O/G8H medium borderline
Svir02G0024960.1 Alkaloid G8O/G8H medium borderline
Svir02G0024980.1 Alkaloid G8O/G8H medium borderline
Svir02G0025630.1 Alkaloid G8O/G8H medium borderline
Svir02G0034940.1 Alkaloid G8O/G8H medium borderline
Svir02G0042740.1 Alkaloid G8O/G8H medium borderline
Svir03G0003860.1 Alkaloid G8O/G8H medium borderline
Svir03G0019860.1 Alkaloid G8O/G8H medium borderline
Svir03G0036540.1 Alkaloid G8O/G8H medium borderline
Svir03G0036590.1 Alkaloid G8O/G8H medium borderline
Svir03G0038130.1 Alkaloid G8O/G8H medium borderline
Svir03G0041500.1 Alkaloid G8O/G8H medium borderline
Svir04G0023660.1 Alkaloid G8O/G8H medium borderline
Svir04G0026830.2 Alkaloid G8O/G8H medium borderline
Svir04G0026830.3 Alkaloid G8O/G8H medium borderline
Svir04G0026830.4 Alkaloid G8O/G8H medium borderline
Svir04G0026840.1 Alkaloid G8O/G8H medium borderline
Svir04G0026850.1 Alkaloid G8O/G8H medium borderline
Svir04G0026850.2 Alkaloid G8O/G8H medium borderline
Svir04G0029550.1 Alkaloid G8O/G8H medium borderline
Svir05G0001150.1 Alkaloid G8O/G8H low borderline
Svir06G0006020.1 Alkaloid G8O/G8H medium borderline
Svir06G0006050.1 Alkaloid G8O/G8H medium borderline
Svir06G0006990.1 Alkaloid G8O/G8H medium borderline
Svir06G0015600.1 Alkaloid G8O/G8H medium borderline
Svir06G0020460.1 Alkaloid G8O/G8H medium borderline
Svir07G0002860.1 Alkaloid G8O/G8H medium borderline
Svir07G0007740.1 Alkaloid G8O/G8H medium pass
Svir08G0014060.1 Alkaloid G8O/G8H medium borderline
Svir08G0026900.1 Alkaloid G8O/G8H medium borderline
Svir08G0026910.1 Alkaloid G8O/G8H medium borderline
Svir08G0028730.1 Alkaloid G8O/G8H medium borderline
Svir09G0000770.1 Alkaloid G8O/G8H medium borderline
Svir09G0001180.1 Alkaloid G8O/G8H medium borderline
Svir09G0009210.1 Alkaloid G8O/G8H medium borderline
Svir09G0009250.1 Alkaloid G8O/G8H low borderline
Svir09G0009280.1 Alkaloid G8O/G8H medium borderline
Svir09G0021180.1 Alkaloid G8O/G8H medium borderline
Svir09G0021250.1 Alkaloid G8O/G8H medium borderline
Svir09G0031380.1 Alkaloid G8O/G8H medium borderline
Svir09G0032220.1 Alkaloid G8O/G8H medium borderline
Svir09G0032460.1 Alkaloid G8O/G8H medium borderline