PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Svir01G0002090.1 Alkaloid T3O medium borderline
Svir01G0003800.8 Alkaloid T3O low borderline
Svir01G0003800.9 Alkaloid T3O low borderline
Svir01G0006440.1 Alkaloid T3O medium borderline
Svir01G0006450.1 Alkaloid T3O medium borderline
Svir01G0006530.1 Alkaloid T3O medium borderline
Svir01G0006540.1 Alkaloid T3O medium borderline
Svir01G0014780.1 Alkaloid T3O medium borderline
Svir01G0017550.1 Alkaloid T3O medium borderline
Svir01G0018610.1 Alkaloid T3O medium borderline
Svir01G0024680.1 Alkaloid T3O medium pass
Svir01G0029740.1 Alkaloid T3O low borderline
Svir01G0030270.1 Alkaloid T3O low borderline
Svir01G0032260.1 Alkaloid T3O medium pass
Svir01G0040890.1 Alkaloid T3O low borderline
Svir01G0040970.1 Alkaloid T3O medium pass
Svir02G0000050.1 Alkaloid T3O medium borderline
Svir02G0004830.1 Alkaloid T3O medium borderline
Svir02G0004850.1 Alkaloid T3O medium borderline
Svir02G0011450.1 Alkaloid T3O medium borderline
Svir02G0011830.1 Alkaloid T3O medium borderline
Svir02G0012520.1 Alkaloid T3O medium borderline
Svir02G0012520.2 Alkaloid T3O medium borderline
Svir02G0012520.3 Alkaloid T3O medium borderline
Svir02G0012520.4 Alkaloid T3O medium borderline
Svir02G0012520.5 Alkaloid T3O medium borderline
Svir02G0016540.2 Alkaloid T3O medium borderline
Svir02G0016560.1 Alkaloid T3O medium borderline
Svir02G0016590.1 Alkaloid T3O medium borderline
Svir02G0016590.2 Alkaloid T3O medium borderline
Svir02G0016590.3 Alkaloid T3O medium borderline
Svir02G0016590.4 Alkaloid T3O medium borderline
Svir02G0019880.1 Alkaloid T3O medium pass
Svir02G0022610.1 Alkaloid T3O medium borderline
Svir02G0024990.1 Alkaloid T3O medium borderline
Svir02G0025000.1 Alkaloid T3O medium borderline
Svir02G0025010.1 Alkaloid T3O medium borderline
Svir02G0025020.1 Alkaloid T3O medium borderline
Svir02G0026210.1 Alkaloid T3O medium pass
Svir02G0032040.1 Alkaloid T3O medium pass
Svir02G0032110.1 Alkaloid T3O medium borderline
Svir02G0037570.1 Alkaloid T3O medium pass
Svir02G0037580.1 Alkaloid T3O medium pass
Svir02G0040870.1 Alkaloid T3O medium borderline
Svir02G0040880.1 Alkaloid T3O medium borderline
Svir02G0043510.1 Alkaloid T3O medium pass
Svir02G0047510.1 Alkaloid T3O medium borderline
Svir02G0047920.1 Alkaloid T3O medium borderline
Svir03G0010470.1 Alkaloid T3O medium pass
Svir03G0011920.1 Alkaloid T3O medium pass