PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
Svir01G0001800.1 Rosmarinic Acid RAS medium pass
Svir01G0012090.1 Rosmarinic Acid RAS low borderline
Svir01G0015410.1 Rosmarinic Acid RAS low borderline
Svir01G0025840.1 Rosmarinic Acid RAS medium pass
Svir01G0035470.1 Rosmarinic Acid RAS low borderline
Svir01G0042330.1 Rosmarinic Acid RAS low borderline
Svir02G0023680.1 Rosmarinic Acid RAS medium pass
Svir02G0023690.2 Rosmarinic Acid RAS medium pass
Svir02G0033160.1 Rosmarinic Acid RAS low borderline
Svir03G0003250.1 Rosmarinic Acid RAS medium pass
Svir03G0006130.1 Rosmarinic Acid RAS low borderline
Svir03G0006130.2 Rosmarinic Acid RAS low borderline
Svir03G0009180.1 Rosmarinic Acid RAS low borderline
Svir03G0011730.1 Rosmarinic Acid RAS low borderline
Svir03G0012080.1 Rosmarinic Acid RAS low borderline
Svir03G0020050.1 Rosmarinic Acid RAS low borderline
Svir04G0005120.1 Rosmarinic Acid RAS medium pass
Svir04G0005130.1 Rosmarinic Acid RAS medium pass
Svir04G0005160.1 Rosmarinic Acid RAS medium pass
Svir04G0007590.1 Rosmarinic Acid RAS low borderline
Svir04G0011290.1 Rosmarinic Acid RAS low borderline
Svir04G0031110.1 Rosmarinic Acid RAS medium pass
Svir04G0031120.1 Rosmarinic Acid RAS medium pass
Svir05G0003240.1 Rosmarinic Acid RAS medium pass
Svir05G0003260.1 Rosmarinic Acid RAS low borderline
Svir05G0003270.1 Rosmarinic Acid RAS low borderline
Svir05G0007450.1 Rosmarinic Acid RAS medium pass
Svir05G0010800.1 Rosmarinic Acid RAS medium pass
Svir05G0013550.1 Rosmarinic Acid RAS low borderline
Svir05G0024890.1 Rosmarinic Acid RAS low borderline
Svir05G0024910.1 Rosmarinic Acid RAS low borderline
Svir05G0034830.1 Rosmarinic Acid RAS medium pass
Svir05G0047650.1 Rosmarinic Acid RAS medium pass
Svir06G0010290.1 Rosmarinic Acid RAS medium pass
Svir06G0019120.1 Rosmarinic Acid RAS medium pass
Svir07G0005670.1 Rosmarinic Acid RAS medium pass
Svir07G0008580.1 Rosmarinic Acid RAS medium pass
Svir07G0017530.1 Rosmarinic Acid RAS medium borderline
Svir07G0026120.1 Rosmarinic Acid RAS low borderline
Svir07G0031620.1 Rosmarinic Acid RAS medium pass
Svir08G0014840.1 Rosmarinic Acid RAS medium pass
Svir08G0015280.1 Rosmarinic Acid RAS medium pass
Svir08G0021520.1 Rosmarinic Acid RAS medium pass
Svir08G0021550.1 Rosmarinic Acid RAS medium pass
Svir08G0023290.1 Rosmarinic Acid RAS medium pass
Svir09G0022080.1 Rosmarinic Acid RAS medium pass
Svir09G0029870.1 Rosmarinic Acid RAS medium pass
Svir09G0030080.1 Rosmarinic Acid RAS medium pass
Svir09G0033090.1 Rosmarinic Acid RAS low borderline
Svir09G0033500.1 Rosmarinic Acid RAS medium pass