PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Svir01G0032260.1 Steroid BR6OX1/CYP85A1 medium borderline
Svir02G0019880.1 Steroid BR6OX1/CYP85A1 medium borderline
Svir02G0024980.1 Steroid BR6OX1/CYP85A1 low borderline
Svir02G0026210.1 Steroid BR6OX1/CYP85A1 medium borderline
Svir02G0028810.1 Steroid BR6OX1/CYP85A1 low borderline
Svir02G0040870.1 Steroid BR6OX1/CYP85A1 medium borderline
Svir03G0012910.1 Steroid BR6OX1/CYP85A1 medium borderline
Svir03G0040030.1 Steroid BR6OX1/CYP85A1 low borderline
Svir04G0026830.1 Steroid BR6OX1/CYP85A1 low borderline
Svir04G0026830.2 Steroid BR6OX1/CYP85A1 low borderline
Svir04G0026830.3 Steroid BR6OX1/CYP85A1 low borderline
Svir06G0010190.1 Steroid BR6OX1/CYP85A1 medium borderline
Svir07G0021340.1 Steroid BR6OX1/CYP85A1 medium borderline
Svir07G0031390.1 Steroid BR6OX1/CYP85A1 medium borderline
Svir08G0007840.1 Steroid BR6OX1/CYP85A1 medium borderline
Svir08G0019140.1 Steroid BR6OX1/CYP85A1 medium borderline
Svir09G0021160.1 Steroid BR6OX1/CYP85A1 medium borderline
Svir09G0021180.1 Steroid BR6OX1/CYP85A1 medium borderline
Svir09G0021200.1 Steroid BR6OX1/CYP85A1 medium borderline
Svir09G0021250.1 Steroid BR6OX1/CYP85A1 medium borderline
Svir09G0021270.1 Steroid BR6OX1/CYP85A1 medium borderline
Svir09G0026650.1 Steroid BR6OX1/CYP85A1 medium borderline
Svir09G0037480.2 Steroid BR6OX1/CYP85A1 low borderline
Svir01G0000610.1 Steroid BR6OX2/CYP85A2 low borderline
Svir01G0002090.1 Steroid BR6OX2/CYP85A2 low borderline
Svir01G0006450.1 Steroid BR6OX2/CYP85A2 low borderline
Svir01G0006540.1 Steroid BR6OX2/CYP85A2 low borderline
Svir01G0014530.1 Steroid BR6OX2/CYP85A2 low borderline
Svir01G0014780.1 Steroid BR6OX2/CYP85A2 low borderline
Svir01G0018710.1 Steroid BR6OX2/CYP85A2 low borderline
Svir01G0024680.1 Steroid BR6OX2/CYP85A2 low borderline
Svir01G0029740.1 Steroid BR6OX2/CYP85A2 low borderline
Svir02G0004850.1 Steroid BR6OX2/CYP85A2 low borderline
Svir02G0016540.2 Steroid BR6OX2/CYP85A2 low borderline
Svir02G0024990.1 Steroid BR6OX2/CYP85A2 low borderline
Svir02G0025000.1 Steroid BR6OX2/CYP85A2 low borderline
Svir02G0025010.1 Steroid BR6OX2/CYP85A2 low borderline
Svir02G0025020.1 Steroid BR6OX2/CYP85A2 low borderline
Svir02G0032040.1 Steroid BR6OX2/CYP85A2 low borderline
Svir02G0040880.1 Steroid BR6OX2/CYP85A2 medium borderline
Svir02G0042740.1 Steroid BR6OX2/CYP85A2 low borderline
Svir02G0046130.1 Steroid BR6OX2/CYP85A2 low borderline
Svir03G0003860.1 Steroid BR6OX2/CYP85A2 low borderline
Svir03G0010470.1 Steroid BR6OX2/CYP85A2 low borderline
Svir03G0011920.1 Steroid BR6OX2/CYP85A2 low borderline
Svir03G0021470.1 Steroid BR6OX2/CYP85A2 low borderline
Svir03G0022760.1 Steroid BR6OX2/CYP85A2 low borderline
Svir03G0024740.1 Steroid BR6OX2/CYP85A2 low borderline
Svir03G0036550.1 Steroid BR6OX2/CYP85A2 low borderline
Svir03G0036570.1 Steroid BR6OX2/CYP85A2 low borderline