PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Svir03G0036590.1 Steroid BR6OX2/CYP85A2 low borderline
Svir03G0037780.1 Steroid BR6OX2/CYP85A2 low borderline
Svir03G0038130.1 Steroid BR6OX2/CYP85A2 low borderline
Svir04G0002170.1 Steroid BR6OX2/CYP85A2 low borderline
Svir04G0002170.2 Steroid BR6OX2/CYP85A2 low borderline
Svir04G0002170.3 Steroid BR6OX2/CYP85A2 low borderline
Svir04G0002170.4 Steroid BR6OX2/CYP85A2 low borderline
Svir04G0002170.6 Steroid BR6OX2/CYP85A2 low borderline
Svir04G0002170.7 Steroid BR6OX2/CYP85A2 low borderline
Svir04G0002170.8 Steroid BR6OX2/CYP85A2 low borderline
Svir04G0017770.1 Steroid BR6OX2/CYP85A2 low borderline
Svir04G0022930.1 Steroid BR6OX2/CYP85A2 low borderline
Svir04G0023660.1 Steroid BR6OX2/CYP85A2 low borderline
Svir04G0024440.1 Steroid BR6OX2/CYP85A2 low borderline
Svir04G0026830.4 Steroid BR6OX2/CYP85A2 low borderline
Svir04G0026840.1 Steroid BR6OX2/CYP85A2 low borderline
Svir05G0001090.1 Steroid BR6OX2/CYP85A2 low borderline
Svir05G0001160.1 Steroid BR6OX2/CYP85A2 low borderline
Svir05G0001160.2 Steroid BR6OX2/CYP85A2 low borderline
Svir05G0009050.1 Steroid BR6OX2/CYP85A2 low borderline
Svir05G0009070.1 Steroid BR6OX2/CYP85A2 low borderline
Svir05G0013700.1 Steroid BR6OX2/CYP85A2 low borderline
Svir05G0013930.1 Steroid BR6OX2/CYP85A2 low borderline
Svir05G0027340.1 Steroid BR6OX2/CYP85A2 low borderline
Svir05G0031150.1 Steroid BR6OX2/CYP85A2 low borderline
Svir05G0031150.2 Steroid BR6OX2/CYP85A2 low borderline
Svir05G0031170.1 Steroid BR6OX2/CYP85A2 low borderline
Svir05G0031170.2 Steroid BR6OX2/CYP85A2 low borderline
Svir05G0039650.1 Steroid BR6OX2/CYP85A2 low borderline
Svir05G0042270.1 Steroid BR6OX2/CYP85A2 low borderline
Svir06G0000430.1 Steroid BR6OX2/CYP85A2 low borderline
Svir06G0000440.1 Steroid BR6OX2/CYP85A2 low borderline
Svir06G0002400.1 Steroid BR6OX2/CYP85A2 low borderline
Svir06G0002400.2 Steroid BR6OX2/CYP85A2 low borderline
Svir06G0006020.1 Steroid BR6OX2/CYP85A2 low borderline
Svir06G0006990.1 Steroid BR6OX2/CYP85A2 low borderline
Svir06G0008500.1 Steroid BR6OX2/CYP85A2 low borderline
Svir06G0011490.1 Steroid BR6OX2/CYP85A2 low borderline
Svir06G0011890.1 Steroid BR6OX2/CYP85A2 low borderline
Svir06G0015600.1 Steroid BR6OX2/CYP85A2 low borderline
Svir06G0017590.1 Steroid BR6OX2/CYP85A2 low borderline
Svir06G0018180.1 Steroid BR6OX2/CYP85A2 low borderline
Svir06G0019850.1 Steroid BR6OX2/CYP85A2 low borderline
Svir06G0020450.1 Steroid BR6OX2/CYP85A2 low borderline
Svir06G0020470.1 Steroid BR6OX2/CYP85A2 low borderline
Svir06G0027140.1 Steroid BR6OX2/CYP85A2 low borderline
Svir07G0001740.1 Steroid BR6OX2/CYP85A2 low borderline
Svir07G0006450.1 Steroid BR6OX2/CYP85A2 low borderline
Svir07G0010370.1 Steroid BR6OX2/CYP85A2 low borderline
Svir07G0016030.1 Steroid BR6OX2/CYP85A2 low borderline