PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status
Svir01G0004960.1 Phenylpropanoid COMT low borderline
Svir01G0005010.1 Phenylpropanoid COMT low borderline
Svir01G0041510.1 Phenylpropanoid COMT medium pass
Svir02G0009710.1 Phenylpropanoid COMT medium pass
Svir02G0020820.3 Phenylpropanoid COMT low borderline
Svir03G0000560.1 Phenylpropanoid COMT low borderline
Svir03G0019790.1 Phenylpropanoid COMT medium pass
Svir03G0019800.1 Phenylpropanoid COMT medium pass
Svir03G0019810.1 Phenylpropanoid COMT medium pass
Svir03G0019820.1 Phenylpropanoid COMT medium pass
Svir03G0019830.1 Phenylpropanoid COMT medium pass
Svir03G0027130.1 Phenylpropanoid COMT medium pass
Svir03G0044100.1 Phenylpropanoid COMT low borderline
Svir05G0013730.1 Phenylpropanoid COMT medium pass
Svir05G0035100.1 Phenylpropanoid COMT low borderline
Svir05G0035100.2 Phenylpropanoid COMT low borderline
Svir05G0036190.1 Phenylpropanoid COMT low borderline
Svir06G0006330.1 Phenylpropanoid COMT medium pass
Svir06G0010020.1 Phenylpropanoid COMT medium pass
Svir06G0017350.1 Phenylpropanoid COMT low borderline
Svir06G0020250.1 Phenylpropanoid COMT low borderline
Svir07G0002610.1 Phenylpropanoid COMT medium pass
Svir07G0008650.1 Phenylpropanoid COMT medium pass
Svir07G0008660.1 Phenylpropanoid COMT low borderline
Svir08G0010640.1 Phenylpropanoid COMT low borderline
Svir08G0010650.1 Phenylpropanoid COMT medium pass
Svir08G0010660.1 Phenylpropanoid COMT low borderline
Svir08G0010670.1 Phenylpropanoid COMT low borderline
Svir08G0012110.1 Phenylpropanoid COMT low borderline
Svir08G0012120.1 Phenylpropanoid COMT low borderline
Svir08G0012500.1 Phenylpropanoid COMT low borderline
Svir08G0012650.1 Phenylpropanoid COMT medium pass
Svir08G0012660.1 Phenylpropanoid COMT low borderline
Svir08G0014560.1 Phenylpropanoid COMT medium pass
Svir08G0016310.1 Phenylpropanoid COMT medium pass
Svir08G0016640.1 Phenylpropanoid COMT low borderline
Svir08G0023210.1 Phenylpropanoid COMT medium pass
Svir08G0023240.1 Phenylpropanoid COMT medium pass
Svir08G0023300.1 Phenylpropanoid COMT medium pass
Svir08G0023310.1 Phenylpropanoid COMT medium pass
Svir08G0024140.1 Phenylpropanoid COMT medium pass
Svir08G0024200.1 Phenylpropanoid COMT medium pass
Svir08G0027170.1 Phenylpropanoid COMT medium pass
Svir08G0027190.1 Phenylpropanoid COMT medium pass
Svir08G0027210.1 Phenylpropanoid COMT medium pass
Svir08G0027250.1 Phenylpropanoid COMT medium pass
Svir08G0027290.1 Phenylpropanoid COMT medium pass
Svir08G0027310.1 Phenylpropanoid COMT medium pass
Svir08G0027370.1 Phenylpropanoid COMT medium pass
Svir08G0027390.1 Phenylpropanoid COMT medium pass