PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Svir07G0007260.1 Alkaloid GS low borderline
Svir07G0007620.1 Alkaloid GS low borderline
Svir07G0007620.2 Alkaloid GS low borderline
Svir07G0026410.1 Alkaloid GS high pass
Svir07G0026410.2 Alkaloid GS high pass
Svir07G0026410.3 Alkaloid GS high pass
Svir09G0019870.1 Alkaloid GS medium pass
Svir09G0019880.1 Alkaloid GS low borderline
Svir09G0031840.1 Alkaloid GS low borderline
Svir09G0032760.1 Alkaloid GS high pass
Svir09G0036130.1 Alkaloid GS low borderline
Svir09G0036130.2 Alkaloid GS low borderline
Svir09G0063530.1 Alkaloid GS low borderline
Svir01G0017500.1 Alkaloid H6H low borderline
Svir01G0037550.1 Alkaloid H6H medium borderline
Svir01G0041160.1 Alkaloid H6H medium borderline
Svir02G0000260.1 Alkaloid H6H medium pass
Svir02G0005560.1 Alkaloid H6H medium pass
Svir02G0010230.1 Alkaloid H6H medium pass
Svir03G0003110.1 Alkaloid H6H high pass
Svir03G0003500.1 Alkaloid H6H medium pass
Svir03G0005530.1 Alkaloid H6H medium borderline
Svir03G0005530.2 Alkaloid H6H medium borderline
Svir03G0008520.1 Alkaloid H6H low borderline
Svir03G0008520.3 Alkaloid H6H low borderline
Svir03G0008520.4 Alkaloid H6H low borderline
Svir03G0010140.1 Alkaloid H6H high pass
Svir03G0010150.1 Alkaloid H6H medium borderline
Svir03G0015050.1 Alkaloid H6H low borderline
Svir03G0019940.1 Alkaloid H6H low borderline
Svir03G0026090.1 Alkaloid H6H medium pass
Svir03G0035250.1 Alkaloid H6H medium borderline
Svir03G0035250.2 Alkaloid H6H medium borderline
Svir03G0035250.3 Alkaloid H6H medium borderline
Svir03G0039720.1 Alkaloid H6H medium pass
Svir03G0039740.1 Alkaloid H6H medium pass
Svir03G0039770.1 Alkaloid H6H medium borderline
Svir03G0039800.1 Alkaloid H6H medium borderline
Svir04G0001780.1 Alkaloid H6H low borderline
Svir04G0004840.1 Alkaloid H6H low borderline
Svir04G0004950.1 Alkaloid H6H medium borderline
Svir04G0004950.3 Alkaloid H6H medium borderline
Svir04G0005880.1 Alkaloid H6H medium borderline
Svir04G0005890.1 Alkaloid H6H medium borderline
Svir04G0005900.1 Alkaloid H6H medium borderline
Svir04G0005930.1 Alkaloid H6H low borderline
Svir04G0005930.2 Alkaloid H6H low borderline
Svir04G0005930.3 Alkaloid H6H low borderline
Svir04G0005960.1 Alkaloid H6H low borderline
Svir04G0005970.1 Alkaloid H6H low borderline