PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Svir07G0021340.1 Alkaloid IO medium borderline
Svir08G0019120.1 Alkaloid IO medium borderline
Svir09G0020110.1 Alkaloid IO medium borderline
Svir09G0020240.1 Alkaloid IO high pass
Svir09G0020250.1 Alkaloid IO medium pass
Svir09G0052880.1 Alkaloid IO low borderline
Svir09G0060560.1 Alkaloid IO medium borderline
Svir09G0039890.1 Alkaloid ISY medium pass
Svir09G0039910.1 Alkaloid ISY medium pass
Svir09G0039910.2 Alkaloid ISY medium pass
Svir09G0039910.3 Alkaloid ISY medium pass
Svir09G0039920.1 Alkaloid ISY medium pass
Svir01G0033420.1 Alkaloid LAMT medium borderline
Svir02G0013550.1 Alkaloid LAMT medium borderline
Svir03G0003390.1 Alkaloid LAMT medium borderline
Svir03G0003400.1 Alkaloid LAMT medium borderline
Svir04G0011820.1 Alkaloid LAMT medium borderline
Svir04G0011830.1 Alkaloid LAMT medium borderline
Svir04G0011840.1 Alkaloid LAMT medium borderline
Svir04G0011850.1 Alkaloid LAMT medium borderline
Svir04G0015450.1 Alkaloid LAMT low borderline
Svir06G0018930.1 Alkaloid LAMT low borderline
Svir06G0018930.2 Alkaloid LAMT low borderline
Svir06G0018930.3 Alkaloid LAMT low borderline
Svir09G0021130.1 Alkaloid LAMT medium borderline
Svir09G0041470.1 Alkaloid LAMT medium borderline
Svir09G0041470.2 Alkaloid LAMT medium borderline
Svir01G0014670.1 Alkaloid MPO medium pass
Svir01G0024330.1 Alkaloid MPO medium pass
Svir02G0040650.1 Alkaloid MPO medium pass
Svir07G0015500.1 Alkaloid MPO high pass
Svir02G0010880.1 Alkaloid NCS medium borderline
Svir02G0010880.2 Alkaloid NCS medium borderline
Svir02G0017100.1 Alkaloid NCS medium pass
Svir02G0017110.1 Alkaloid NCS medium pass
Svir02G0017120.1 Alkaloid NCS medium pass
Svir02G0017130.1 Alkaloid NCS medium pass
Svir02G0025750.1 Alkaloid NCS medium borderline
Svir02G0025760.1 Alkaloid NCS medium borderline
Svir03G0004330.1 Alkaloid NCS medium borderline
Svir03G0004340.1 Alkaloid NCS medium borderline
Svir03G0010120.1 Alkaloid NCS medium borderline
Svir03G0011600.1 Alkaloid NCS medium borderline
Svir04G0004950.2 Alkaloid NCS medium borderline
Svir04G0004950.4 Alkaloid NCS medium borderline
Svir05G0002930.1 Alkaloid NCS medium borderline
Svir05G0002930.2 Alkaloid NCS medium borderline
Svir05G0002930.3 Alkaloid NCS medium borderline
Svir05G0014430.1 Alkaloid NCS medium borderline
Svir05G0014430.2 Alkaloid NCS medium borderline