PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Svir06G0004050.11 Terpenoid GGPPS medium borderline
Svir06G0004050.12 Terpenoid GGPPS medium borderline
Svir06G0004050.13 Terpenoid GGPPS medium borderline
Svir06G0004050.14 Terpenoid GGPPS medium borderline
Svir06G0004050.15 Terpenoid GGPPS medium borderline
Svir06G0004050.16 Terpenoid GGPPS medium borderline
Svir06G0004050.17 Terpenoid GGPPS medium borderline
Svir06G0004050.18 Terpenoid GGPPS medium borderline
Svir06G0004050.19 Terpenoid GGPPS medium borderline
Svir06G0004050.2 Terpenoid GGPPS medium borderline
Svir06G0004050.3 Terpenoid GGPPS medium borderline
Svir06G0004050.4 Terpenoid GGPPS medium borderline
Svir06G0004050.5 Terpenoid GGPPS medium borderline
Svir06G0004050.6 Terpenoid GGPPS medium borderline
Svir06G0004050.7 Terpenoid GGPPS medium borderline
Svir06G0004050.8 Terpenoid GGPPS medium borderline
Svir06G0004050.9 Terpenoid GGPPS medium borderline
Svir05G0046140.1 Terpenoid GPPS low borderline
Svir05G0046140.2 Terpenoid GPPS low borderline
Svir05G0046140.5 Terpenoid GPPS low borderline
Svir06G0003960.1 Terpenoid GPPS medium borderline
Svir06G0003990.1 Terpenoid GPPS medium borderline
Svir06G0003990.2 Terpenoid GPPS medium borderline
Svir06G0003990.3 Terpenoid GPPS medium borderline
Svir09G0011540.1 Terpenoid HDR/IspH medium pass
Svir09G0011550.1 Terpenoid HDR/IspH high pass
Svir01G0025150.1 Terpenoid HDS/IspG high pass
Svir01G0033010.1 Terpenoid HMGR medium pass
Svir02G0029250.1 Terpenoid HMGR medium pass
Svir02G0029250.2 Terpenoid HMGR medium pass
Svir06G0023930.1 Terpenoid HMGR medium pass
Svir06G0023930.2 Terpenoid HMGR medium pass
Svir02G0031580.1 Terpenoid HMGS high pass
Svir06G0026840.1 Terpenoid HMGS high pass
Svir09G0062080.1 Terpenoid HMGS high pass
Svir09G0062080.2 Terpenoid HMGS high pass
Svir02G0038640.1 Terpenoid IDI medium pass
Svir03G0026690.1 Terpenoid IDI medium pass
Svir03G0039790.1 Terpenoid IDI low borderline
Svir05G0029190.1 Terpenoid IDI low borderline
Svir05G0044540.1 Terpenoid MCT/IspD high pass
Svir06G0002860.1 Terpenoid MCT/IspD low borderline
Svir07G0026520.1 Terpenoid MCT/IspD low borderline
Svir08G0019340.1 Terpenoid MCT/IspD low borderline
Svir01G0030540.1 Terpenoid MDS/IspF high pass
Svir05G0051360.1 Terpenoid MDS/IspF low borderline
Svir01G0039290.1 Terpenoid MVD medium pass
Svir03G0044540.1 Terpenoid MVD medium pass
Svir05G0041030.1 Terpenoid MVD low borderline
Svir06G0010380.1 Terpenoid MVD low borderline