PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Gene Pathway Family Confidence Status
Svir09G0059170.1 Rosmarinic Acid 4CL medium pass
Svir09G0059170.2 Rosmarinic Acid 4CL medium pass
Svir09G0059170.3 Rosmarinic Acid 4CL medium pass
Svir09G0060590.1 Rosmarinic Acid 4CL medium pass
Svir09G0060590.2 Rosmarinic Acid 4CL medium pass
Svir09G0060600.1 Rosmarinic Acid 4CL medium pass
Svir09G0060620.1 Rosmarinic Acid 4CL medium pass
Svir09G0060730.1 Rosmarinic Acid 4CL medium pass
Svir09G0060940.1 Rosmarinic Acid 4CL medium pass
Svir01G0000610.1 Rosmarinic Acid C4H low borderline
Svir01G0002090.1 Rosmarinic Acid C4H low borderline
Svir01G0003800.1 Rosmarinic Acid C4H low borderline
Svir01G0003800.2 Rosmarinic Acid C4H low borderline
Svir01G0003800.3 Rosmarinic Acid C4H low borderline
Svir01G0003800.4 Rosmarinic Acid C4H low borderline
Svir01G0003800.5 Rosmarinic Acid C4H low borderline
Svir01G0003800.6 Rosmarinic Acid C4H low borderline
Svir01G0003800.7 Rosmarinic Acid C4H low borderline
Svir01G0003800.8 Rosmarinic Acid C4H low borderline
Svir01G0003800.9 Rosmarinic Acid C4H low borderline
Svir01G0004680.1 Rosmarinic Acid C4H low borderline
Svir01G0004680.2 Rosmarinic Acid C4H low borderline
Svir01G0006440.1 Rosmarinic Acid C4H medium pass
Svir01G0006450.1 Rosmarinic Acid C4H medium pass
Svir01G0006520.1 Rosmarinic Acid C4H low borderline
Svir01G0006530.1 Rosmarinic Acid C4H low borderline
Svir01G0006540.1 Rosmarinic Acid C4H medium pass
Svir01G0007680.1 Rosmarinic Acid C4H low borderline
Svir01G0007680.2 Rosmarinic Acid C4H low borderline
Svir01G0014530.1 Rosmarinic Acid C4H medium pass
Svir01G0014780.1 Rosmarinic Acid C4H low borderline
Svir01G0017550.1 Rosmarinic Acid C4H low borderline
Svir01G0017730.1 Rosmarinic Acid C4H medium pass
Svir01G0018610.1 Rosmarinic Acid C4H low borderline
Svir01G0018710.1 Rosmarinic Acid C4H low borderline
Svir01G0018730.1 Rosmarinic Acid C4H low borderline
Svir01G0028390.1 Rosmarinic Acid C4H medium pass
Svir01G0029260.1 Rosmarinic Acid C4H low borderline
Svir01G0032260.1 Rosmarinic Acid C4H low borderline
Svir01G0040970.1 Rosmarinic Acid C4H low borderline
Svir02G0000050.1 Rosmarinic Acid C4H low borderline
Svir02G0004830.1 Rosmarinic Acid C4H medium pass
Svir02G0004850.1 Rosmarinic Acid C4H medium pass
Svir02G0011450.1 Rosmarinic Acid C4H medium pass
Svir02G0011820.1 Rosmarinic Acid C4H low borderline
Svir02G0011830.1 Rosmarinic Acid C4H low borderline
Svir02G0012520.1 Rosmarinic Acid C4H low borderline
Svir02G0012520.2 Rosmarinic Acid C4H low borderline
Svir02G0012520.3 Rosmarinic Acid C4H low borderline
Svir02G0012520.4 Rosmarinic Acid C4H low borderline