PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Svir04G0025900.5 Flavonoid UFGT medium pass
Svir04G0025900.6 Flavonoid UFGT medium pass
Svir04G0025980.1 Flavonoid UFGT high pass
Svir05G0010540.1 Flavonoid UFGT medium pass
Svir05G0013240.1 Flavonoid UFGT medium pass
Svir05G0013250.1 Flavonoid UFGT medium pass
Svir05G0013630.1 Flavonoid UFGT medium pass
Svir05G0025260.1 Flavonoid UFGT medium pass
Svir05G0025280.1 Flavonoid UFGT medium pass
Svir05G0026310.1 Flavonoid UFGT high pass
Svir05G0026310.2 Flavonoid UFGT high pass
Svir05G0030030.1 Flavonoid UFGT medium pass
Svir05G0030990.1 Flavonoid UFGT high pass
Svir05G0033600.1 Flavonoid UFGT medium pass
Svir05G0033610.1 Flavonoid UFGT medium pass
Svir05G0033630.1 Flavonoid UFGT medium pass
Svir05G0033640.1 Flavonoid UFGT medium pass
Svir05G0033670.1 Flavonoid UFGT high pass
Svir05G0033680.1 Flavonoid UFGT high pass
Svir05G0033690.1 Flavonoid UFGT medium pass
Svir05G0033700.1 Flavonoid UFGT medium pass
Svir05G0033720.1 Flavonoid UFGT high pass
Svir05G0033730.1 Flavonoid UFGT high pass
Svir05G0033750.1 Flavonoid UFGT medium pass
Svir05G0034020.1 Flavonoid UFGT high pass
Svir05G0038630.1 Flavonoid UFGT medium pass
Svir05G0038640.1 Flavonoid UFGT medium pass
Svir05G0038760.1 Flavonoid UFGT medium pass
Svir05G0042970.1 Flavonoid UFGT high pass
Svir05G0042980.1 Flavonoid UFGT high pass
Svir05G0043120.1 Flavonoid UFGT low borderline
Svir06G0003200.1 Flavonoid UFGT high pass
Svir06G0003200.2 Flavonoid UFGT high pass
Svir06G0005410.1 Flavonoid UFGT medium pass
Svir06G0008350.1 Flavonoid UFGT high pass
Svir06G0008360.1 Flavonoid UFGT medium pass
Svir06G0012010.1 Flavonoid UFGT medium pass
Svir06G0012400.1 Flavonoid UFGT high pass
Svir06G0018490.1 Flavonoid UFGT high pass
Svir06G0022050.1 Flavonoid UFGT high pass
Svir06G0022060.1 Flavonoid UFGT high pass
Svir07G0003730.1 Flavonoid UFGT medium pass
Svir07G0004530.1 Flavonoid UFGT medium pass
Svir07G0004550.1 Flavonoid UFGT medium pass
Svir07G0004560.1 Flavonoid UFGT high pass
Svir07G0005500.1 Flavonoid UFGT low borderline
Svir07G0005990.1 Flavonoid UFGT medium pass
Svir07G0006050.1 Flavonoid UFGT medium pass
Svir07G0007870.1 Flavonoid UFGT medium pass
Svir07G0009320.1 Flavonoid UFGT high pass