PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Svir02G0010760.1 Alkaloid 7DLGT high pass
Svir02G0010780.1 Alkaloid 7DLGT high pass
Svir02G0010800.1 Alkaloid 7DLGT medium pass
Svir02G0010920.1 Alkaloid 7DLGT high pass
Svir02G0011670.1 Alkaloid 7DLGT low borderline
Svir02G0012060.1 Alkaloid 7DLGT low borderline
Svir02G0012090.1 Alkaloid 7DLGT low borderline
Svir02G0018040.1 Alkaloid 7DLGT medium pass
Svir02G0020250.1 Alkaloid 7DLGT low borderline
Svir02G0020300.1 Alkaloid 7DLGT medium pass
Svir02G0021830.1 Alkaloid 7DLGT low borderline
Svir02G0025360.1 Alkaloid 7DLGT low borderline
Svir02G0031190.1 Alkaloid 7DLGT low borderline
Svir02G0031210.1 Alkaloid 7DLGT medium pass
Svir02G0031250.1 Alkaloid 7DLGT medium pass
Svir02G0031260.1 Alkaloid 7DLGT low borderline
Svir02G0031280.1 Alkaloid 7DLGT low borderline
Svir02G0031290.1 Alkaloid 7DLGT medium pass
Svir02G0031310.1 Alkaloid 7DLGT medium pass
Svir02G0035850.1 Alkaloid 7DLGT medium pass
Svir02G0035880.1 Alkaloid 7DLGT medium pass
Svir02G0035900.1 Alkaloid 7DLGT medium pass
Svir02G0036530.1 Alkaloid 7DLGT low borderline
Svir02G0036560.1 Alkaloid 7DLGT medium pass
Svir02G0036570.1 Alkaloid 7DLGT low borderline
Svir02G0036580.1 Alkaloid 7DLGT medium pass
Svir02G0036590.1 Alkaloid 7DLGT medium pass
Svir02G0036600.1 Alkaloid 7DLGT low borderline
Svir02G0036610.1 Alkaloid 7DLGT medium pass
Svir02G0039510.1 Alkaloid 7DLGT medium pass
Svir02G0039520.1 Alkaloid 7DLGT medium pass
Svir02G0042590.1 Alkaloid 7DLGT low borderline
Svir02G0044260.1 Alkaloid 7DLGT medium pass
Svir02G0044260.2 Alkaloid 7DLGT medium pass
Svir02G0044260.3 Alkaloid 7DLGT medium pass
Svir02G0044260.4 Alkaloid 7DLGT medium pass
Svir02G0047040.1 Alkaloid 7DLGT medium pass
Svir02G0047860.1 Alkaloid 7DLGT low borderline
Svir03G0008810.1 Alkaloid 7DLGT low borderline
Svir03G0010000.1 Alkaloid 7DLGT medium pass
Svir03G0017120.1 Alkaloid 7DLGT medium pass
Svir03G0018980.1 Alkaloid 7DLGT medium pass
Svir03G0018990.1 Alkaloid 7DLGT medium pass
Svir03G0019010.1 Alkaloid 7DLGT low borderline
Svir03G0019020.1 Alkaloid 7DLGT medium pass
Svir03G0019030.1 Alkaloid 7DLGT medium pass
Svir03G0020920.1 Alkaloid 7DLGT low borderline
Svir03G0020940.1 Alkaloid 7DLGT low borderline
Svir03G0020950.1 Alkaloid 7DLGT medium pass
Svir03G0021490.1 Alkaloid 7DLGT low borderline