PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Svir09G0048150.1 Alkaloid TRI/TRII medium pass
Svir09G0050720.1 Alkaloid TRI/TRII medium pass
Svir02G0013680.1 Alkaloid TYDC_DDC medium borderline
Svir03G0008730.1 Alkaloid TYDC_DDC medium borderline
Svir03G0020300.1 Alkaloid TYDC_DDC medium borderline
Svir06G0007770.1 Alkaloid TYDC_DDC medium borderline
Svir06G0007780.1 Alkaloid TYDC_DDC medium borderline
Svir06G0007800.1 Alkaloid TYDC_DDC medium borderline
Svir06G0007800.2 Alkaloid TYDC_DDC medium borderline
Svir08G0014570.1 Alkaloid TYDC_DDC medium borderline
Svir08G0024060.1 Alkaloid TYDC_DDC medium borderline
Svir08G0024460.1 Alkaloid TYDC_DDC medium borderline
Svir08G0027150.1 Alkaloid TYDC_DDC medium borderline
Svir08G0027160.1 Alkaloid TYDC_DDC medium borderline
Svir08G0027180.1 Alkaloid TYDC_DDC medium borderline
Svir08G0027200.1 Alkaloid TYDC_DDC medium borderline
Svir08G0027220.1 Alkaloid TYDC_DDC medium borderline
Svir08G0027240.1 Alkaloid TYDC_DDC medium borderline
Svir08G0027280.1 Alkaloid TYDC_DDC medium borderline
Svir08G0027340.1 Alkaloid TYDC_DDC medium borderline
Svir08G0027360.1 Alkaloid TYDC_DDC medium borderline
Svir08G0027380.1 Alkaloid TYDC_DDC medium borderline
Svir08G0027400.1 Alkaloid TYDC_DDC medium borderline
Svir08G0027420.1 Alkaloid TYDC_DDC medium borderline
Svir08G0027450.1 Alkaloid TYDC_DDC medium borderline
Svir09G0008750.1 Alkaloid TYDC_DDC medium borderline
Svir09G0028180.1 Alkaloid TYDC_DDC medium borderline
Svir09G0028260.1 Alkaloid TYDC_DDC medium borderline
Svir09G0056670.1 Alkaloid TYDC_DDC medium borderline
Svir09G0056670.2 Alkaloid TYDC_DDC medium borderline
Svir09G0056670.3 Alkaloid TYDC_DDC medium borderline
Svir09G0056680.1 Alkaloid TYDC_DDC medium borderline
Svir03G0012870.1 Alkaloid XMT_MXMT_DXMT medium borderline
Svir04G0015440.1 Alkaloid XMT_MXMT_DXMT low borderline
Svir01G0007220.1 Flavonoid 4CL medium pass
Svir01G0012270.1 Flavonoid 4CL medium pass
Svir01G0020010.1 Flavonoid 4CL low borderline
Svir01G0031740.1 Flavonoid 4CL medium pass
Svir02G0017220.1 Flavonoid 4CL low borderline
Svir02G0021900.1 Flavonoid 4CL low borderline
Svir03G0001270.1 Flavonoid 4CL medium pass
Svir03G0002080.1 Flavonoid 4CL medium pass
Svir03G0002110.1 Flavonoid 4CL medium pass
Svir03G0005810.1 Flavonoid 4CL low borderline
Svir03G0005810.2 Flavonoid 4CL low borderline
Svir03G0029240.1 Flavonoid 4CL medium pass
Svir03G0029240.2 Flavonoid 4CL medium pass
Svir03G0029260.1 Flavonoid 4CL medium pass
Svir03G0029260.2 Flavonoid 4CL medium pass
Svir04G0007390.1 Flavonoid 4CL low borderline