PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Svir09G0041180.1 Flavonoid ANR low borderline
Svir09G0041220.1 Flavonoid ANR low borderline
Svir09G0041230.1 Flavonoid ANR low borderline
Svir09G0041230.2 Flavonoid ANR low borderline
Svir09G0041230.3 Flavonoid ANR low borderline
Svir09G0041230.4 Flavonoid ANR low borderline
Svir09G0041230.5 Flavonoid ANR low borderline
Svir09G0041230.6 Flavonoid ANR low borderline
Svir09G0041230.7 Flavonoid ANR low borderline
Svir03G0035250.1 Flavonoid ANS/LDOX medium borderline
Svir03G0039740.1 Flavonoid ANS/LDOX medium borderline
Svir03G0039770.1 Flavonoid ANS/LDOX medium borderline
Svir04G0005900.1 Flavonoid ANS/LDOX low borderline
Svir04G0005910.1 Flavonoid ANS/LDOX medium pass
Svir07G0009310.1 Flavonoid ANS/LDOX medium borderline
Svir07G0029300.1 Flavonoid ANS/LDOX medium borderline
Svir09G0027580.1 Flavonoid ANS/LDOX medium borderline
Svir09G0040910.1 Flavonoid ANS/LDOX medium borderline
Svir01G0040970.1 Flavonoid C4H medium borderline
Svir02G0046270.1 Flavonoid C4H medium borderline
Svir03G0019860.1 Flavonoid C4H low borderline
Svir03G0019890.3 Flavonoid C4H medium borderline
Svir05G0031150.1 Flavonoid C4H medium borderline
Svir05G0031150.2 Flavonoid C4H medium borderline
Svir05G0031170.1 Flavonoid C4H medium borderline
Svir05G0031170.2 Flavonoid C4H medium borderline
Svir05G0039650.1 Flavonoid C4H medium borderline
Svir09G0009250.1 Flavonoid C4H low borderline
Svir02G0040510.1 Flavonoid CHI medium pass
Svir03G0012150.1 Flavonoid CHI medium pass
Svir07G0034130.1 Flavonoid CHI medium pass
Svir08G0001600.1 Flavonoid CHI medium pass
Svir09G0003660.1 Flavonoid CHI medium pass
Svir01G0004630.1 Flavonoid CHS low borderline
Svir02G0002810.1 Flavonoid CHS medium pass
Svir02G0013060.1 Flavonoid CHS medium pass
Svir02G0036430.1 Flavonoid CHS medium pass
Svir02G0036440.1 Flavonoid CHS medium pass
Svir02G0036460.1 Flavonoid CHS medium pass
Svir02G0036470.1 Flavonoid CHS medium pass
Svir07G0004340.1 Flavonoid CHS medium pass
Svir07G0004350.1 Flavonoid CHS medium pass
Svir07G0004370.1 Flavonoid CHS medium pass
Svir07G0028170.1 Flavonoid CHS medium pass
Svir08G0012100.1 Flavonoid CHS medium pass
Svir08G0012150.1 Flavonoid CHS medium pass
Svir08G0014500.1 Flavonoid CHS medium pass
Svir08G0016270.1 Flavonoid CHS medium pass
Svir08G0016280.1 Flavonoid CHS medium pass
Svir08G0016300.1 Flavonoid CHS medium pass