PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Svir04G0026850.1 Rosmarinic Acid C4H low borderline
Svir04G0026850.2 Rosmarinic Acid C4H low borderline
Svir04G0026890.1 Rosmarinic Acid C4H low borderline
Svir04G0026910.1 Rosmarinic Acid C4H low borderline
Svir04G0026950.1 Rosmarinic Acid C4H low borderline
Svir04G0028460.1 Rosmarinic Acid C4H low borderline
Svir04G0028460.2 Rosmarinic Acid C4H low borderline
Svir04G0029550.1 Rosmarinic Acid C4H low borderline
Svir05G0001080.1 Rosmarinic Acid C4H medium pass
Svir05G0001080.2 Rosmarinic Acid C4H low borderline
Svir05G0001090.1 Rosmarinic Acid C4H medium pass
Svir05G0001130.1 Rosmarinic Acid C4H medium pass
Svir05G0001140.1 Rosmarinic Acid C4H medium pass
Svir05G0001150.1 Rosmarinic Acid C4H low borderline
Svir05G0001160.1 Rosmarinic Acid C4H medium pass
Svir05G0001160.2 Rosmarinic Acid C4H medium pass
Svir05G0005460.1 Rosmarinic Acid C4H low borderline
Svir05G0006940.1 Rosmarinic Acid C4H low borderline
Svir05G0009050.1 Rosmarinic Acid C4H medium pass
Svir05G0009070.1 Rosmarinic Acid C4H medium pass
Svir05G0009160.1 Rosmarinic Acid C4H low borderline
Svir05G0013200.1 Rosmarinic Acid C4H low borderline
Svir05G0013700.1 Rosmarinic Acid C4H medium pass
Svir05G0013930.1 Rosmarinic Acid C4H low borderline
Svir05G0015030.1 Rosmarinic Acid C4H low borderline
Svir05G0016120.1 Rosmarinic Acid C4H low borderline
Svir05G0025720.1 Rosmarinic Acid C4H low borderline
Svir05G0025740.1 Rosmarinic Acid C4H low borderline
Svir05G0025760.1 Rosmarinic Acid C4H low borderline
Svir05G0025770.1 Rosmarinic Acid C4H low borderline
Svir05G0025780.1 Rosmarinic Acid C4H low borderline
Svir05G0025780.2 Rosmarinic Acid C4H low borderline
Svir05G0025790.1 Rosmarinic Acid C4H low borderline
Svir05G0025810.1 Rosmarinic Acid C4H low borderline
Svir05G0025830.1 Rosmarinic Acid C4H low borderline
Svir05G0025830.2 Rosmarinic Acid C4H low borderline
Svir05G0025840.1 Rosmarinic Acid C4H low borderline
Svir05G0025850.1 Rosmarinic Acid C4H low borderline
Svir05G0025850.2 Rosmarinic Acid C4H low borderline
Svir05G0027340.1 Rosmarinic Acid C4H low borderline
Svir05G0031150.1 Rosmarinic Acid C4H low borderline
Svir05G0031150.2 Rosmarinic Acid C4H low borderline
Svir05G0031170.1 Rosmarinic Acid C4H low borderline
Svir05G0031170.2 Rosmarinic Acid C4H low borderline
Svir05G0038580.1 Rosmarinic Acid C4H low borderline
Svir05G0039650.1 Rosmarinic Acid C4H medium pass
Svir05G0042320.1 Rosmarinic Acid C4H medium pass
Svir05G0042320.2 Rosmarinic Acid C4H medium pass
Svir05G0050340.1 Rosmarinic Acid C4H medium pass
Svir06G0000430.1 Rosmarinic Acid C4H medium pass