PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Svir04G0013530.1 Alkaloid 7DLH medium borderline
Svir04G0013540.1 Alkaloid 7DLH medium borderline
Svir05G0006940.1 Alkaloid 7DLH medium borderline
Svir05G0025760.1 Alkaloid 7DLH medium borderline
Svir05G0025800.1 Alkaloid 7DLH medium borderline
Svir05G0025810.1 Alkaloid 7DLH medium borderline
Svir05G0025830.2 Alkaloid 7DLH medium borderline
Svir05G0025840.1 Alkaloid 7DLH medium borderline
Svir07G0034410.1 Alkaloid 7DLH medium borderline
Svir07G0034410.2 Alkaloid 7DLH medium borderline
Svir09G0016360.1 Alkaloid 7DLH low borderline
Svir01G0027830.1 Alkaloid 8HGO medium borderline
Svir01G0040620.1 Alkaloid 8HGO medium borderline
Svir02G0044190.1 Alkaloid 8HGO medium borderline
Svir02G0044200.1 Alkaloid 8HGO medium borderline
Svir05G0042310.1 Alkaloid 8HGO low borderline
Svir08G0005770.1 Alkaloid 8HGO low borderline
Svir08G0011340.1 Alkaloid 8HGO medium borderline
Svir08G0011360.1 Alkaloid 8HGO medium borderline
Svir08G0011360.2 Alkaloid 8HGO medium borderline
Svir09G0021390.1 Alkaloid 8HGO low borderline
Svir09G0031830.1 Alkaloid 8HGO medium borderline
Svir09G0031850.1 Alkaloid 8HGO medium borderline
Svir09G0054080.1 Alkaloid 8HGO low borderline
Svir09G0054080.2 Alkaloid 8HGO low borderline
Svir09G0056290.1 Alkaloid 8HGO medium borderline
Svir09G0056290.2 Alkaloid 8HGO medium borderline
Svir09G0056310.1 Alkaloid 8HGO medium borderline
Svir09G0056310.2 Alkaloid 8HGO medium borderline
Svir09G0056320.1 Alkaloid 8HGO medium borderline
Svir09G0056320.2 Alkaloid 8HGO medium borderline
Svir01G0002700.1 Alkaloid ADC low borderline
Svir01G0027550.1 Alkaloid ADC medium pass
Svir01G0027550.2 Alkaloid ADC medium pass
Svir01G0027550.3 Alkaloid ADC medium pass
Svir04G0002380.1 Alkaloid ADC medium pass
Svir06G0011760.1 Alkaloid ADC low borderline
Svir01G0002580.1 Alkaloid BBE medium borderline
Svir01G0019300.1 Alkaloid BBE medium borderline
Svir02G0005150.1 Alkaloid BBE low borderline
Svir04G0020290.1 Alkaloid BBE medium borderline
Svir04G0020300.1 Alkaloid BBE medium borderline
Svir04G0020310.1 Alkaloid BBE medium borderline
Svir04G0020320.1 Alkaloid BBE medium borderline
Svir04G0020330.1 Alkaloid BBE medium borderline
Svir04G0020340.1 Alkaloid BBE medium borderline
Svir04G0020340.2 Alkaloid BBE medium borderline
Svir06G0006230.1 Alkaloid BBE medium borderline
Svir06G0006240.1 Alkaloid BBE medium borderline
Svir06G0006250.1 Alkaloid BBE medium borderline