PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Svir06G0006260.1 Alkaloid BBE medium borderline
Svir06G0011430.1 Alkaloid BBE medium borderline
Svir06G0011430.2 Alkaloid BBE medium borderline
Svir06G0011450.1 Alkaloid BBE medium borderline
Svir06G0011460.1 Alkaloid BBE medium borderline
Svir06G0013870.1 Alkaloid BBE low borderline
Svir06G0024800.1 Alkaloid BBE medium borderline
Svir07G0003460.1 Alkaloid BBE medium borderline
Svir08G0014310.1 Alkaloid BBE medium borderline
Svir08G0014320.1 Alkaloid BBE medium borderline
Svir02G0013120.1 Alkaloid CNMT low borderline
Svir02G0013120.2 Alkaloid CNMT low borderline
Svir02G0013380.1 Alkaloid CNMT medium pass
Svir03G0044100.1 Alkaloid CNMT low borderline
Svir04G0006870.1 Alkaloid CNMT low borderline
Svir04G0006870.2 Alkaloid CNMT low borderline
Svir04G0007950.1 Alkaloid CNMT low borderline
Svir04G0026630.1 Alkaloid CNMT medium borderline
Svir04G0026630.2 Alkaloid CNMT medium borderline
Svir05G0008840.1 Alkaloid CNMT low borderline
Svir05G0020940.1 Alkaloid CNMT low borderline
Svir06G0003350.1 Alkaloid CNMT medium pass
Svir08G0004760.1 Alkaloid CNMT low borderline
Svir08G0004760.2 Alkaloid CNMT low borderline
Svir08G0004760.5 Alkaloid CNMT low borderline
Svir08G0004760.6 Alkaloid CNMT low borderline
Svir08G0004760.7 Alkaloid CNMT low borderline
Svir08G0017880.1 Alkaloid CNMT low borderline
Svir08G0017880.2 Alkaloid CNMT low borderline
Svir08G0017880.3 Alkaloid CNMT low borderline
Svir09G0001650.1 Alkaloid CNMT low borderline
Svir09G0001650.2 Alkaloid CNMT low borderline
Svir09G0002930.1 Alkaloid CNMT low borderline
Svir01G0000060.1 Alkaloid CODM/T6ODM medium borderline
Svir01G0027340.1 Alkaloid CODM/T6ODM medium borderline
Svir01G0037230.1 Alkaloid CODM/T6ODM medium borderline
Svir02G0005550.1 Alkaloid CODM/T6ODM medium borderline
Svir02G0005550.2 Alkaloid CODM/T6ODM medium borderline
Svir02G0015510.1 Alkaloid CODM/T6ODM medium borderline
Svir02G0024610.1 Alkaloid CODM/T6ODM medium borderline
Svir02G0024610.2 Alkaloid CODM/T6ODM medium borderline
Svir03G0003480.1 Alkaloid CODM/T6ODM medium borderline
Svir03G0005530.3 Alkaloid CODM/T6ODM medium borderline
Svir03G0005530.4 Alkaloid CODM/T6ODM medium borderline
Svir03G0008520.2 Alkaloid CODM/T6ODM medium borderline
Svir03G0010130.1 Alkaloid CODM/T6ODM medium borderline
Svir03G0016300.1 Alkaloid CODM/T6ODM medium borderline
Svir03G0024990.1 Alkaloid CODM/T6ODM medium borderline
Svir03G0024990.2 Alkaloid CODM/T6ODM medium borderline
Svir03G0024990.3 Alkaloid CODM/T6ODM medium borderline