PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Svir03G0039390.1 Alkaloid CODM/T6ODM medium borderline
Svir04G0001950.1 Alkaloid CODM/T6ODM medium borderline
Svir04G0005920.1 Alkaloid CODM/T6ODM medium borderline
Svir04G0005950.1 Alkaloid CODM/T6ODM medium borderline
Svir04G0006460.1 Alkaloid CODM/T6ODM medium borderline
Svir04G0006890.1 Alkaloid CODM/T6ODM medium borderline
Svir04G0009260.1 Alkaloid CODM/T6ODM medium borderline
Svir04G0012430.1 Alkaloid CODM/T6ODM medium borderline
Svir04G0026670.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0013420.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0013420.2 Alkaloid CODM/T6ODM medium borderline
Svir05G0014000.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0016040.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0017170.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0020470.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0020990.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0028410.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0040560.1 Alkaloid CODM/T6ODM medium borderline
Svir05G0040560.2 Alkaloid CODM/T6ODM medium borderline
Svir05G0040560.3 Alkaloid CODM/T6ODM medium borderline
Svir05G0049220.1 Alkaloid CODM/T6ODM medium borderline
Svir06G0003020.1 Alkaloid CODM/T6ODM medium borderline
Svir06G0003020.2 Alkaloid CODM/T6ODM medium borderline
Svir06G0021470.1 Alkaloid CODM/T6ODM medium borderline
Svir06G0023300.1 Alkaloid CODM/T6ODM low borderline
Svir06G0028460.1 Alkaloid CODM/T6ODM medium borderline
Svir07G0012330.1 Alkaloid CODM/T6ODM medium borderline
Svir07G0019260.1 Alkaloid CODM/T6ODM medium borderline
Svir07G0023810.1 Alkaloid CODM/T6ODM medium borderline
Svir07G0023830.1 Alkaloid CODM/T6ODM medium borderline
Svir07G0030390.1 Alkaloid CODM/T6ODM medium borderline
Svir08G0010410.1 Alkaloid CODM/T6ODM medium borderline
Svir08G0011050.1 Alkaloid CODM/T6ODM medium borderline
Svir09G0018280.1 Alkaloid CODM/T6ODM medium borderline
Svir09G0027580.1 Alkaloid CODM/T6ODM medium borderline
Svir09G0038190.1 Alkaloid CODM/T6ODM medium borderline
Svir09G0048750.1 Alkaloid CODM/T6ODM medium borderline
Svir09G0061740.1 Alkaloid CODM/T6ODM medium borderline
Svir01G0001920.1 Alkaloid COR low borderline
Svir01G0001920.2 Alkaloid COR low borderline
Svir01G0001920.3 Alkaloid COR low borderline
Svir01G0011690.1 Alkaloid COR medium pass
Svir01G0011700.1 Alkaloid COR medium pass
Svir01G0011730.1 Alkaloid COR medium pass
Svir03G0022860.1 Alkaloid COR medium pass
Svir03G0024220.1 Alkaloid COR medium pass
Svir03G0024240.1 Alkaloid COR medium pass
Svir03G0024260.1 Alkaloid COR medium pass
Svir03G0024280.1 Alkaloid COR medium pass
Svir03G0024280.2 Alkaloid COR medium pass