PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Svir07G0015730.3 Steroid CAS medium pass
Svir07G0015730.4 Steroid CAS medium pass
Svir07G0026360.1 Steroid CAS medium pass
Svir07G0026360.2 Steroid CAS medium pass
Svir08G0006650.1 Steroid CAS medium pass
Svir08G0006650.2 Steroid CAS medium pass
Svir08G0008300.1 Steroid CAS medium pass
Svir08G0008310.1 Steroid CAS medium pass
Svir08G0021970.1 Steroid CAS low borderline
Svir08G0026730.1 Steroid CAS low borderline
Svir09G0028890.1 Steroid CAS medium pass
Svir09G0028890.2 Steroid CAS medium pass
Svir09G0028890.3 Steroid CAS medium pass
Svir09G0039210.1 Steroid CAS medium pass
Svir09G0044740.1 Steroid CAS low borderline
Svir09G0044740.2 Steroid CAS low borderline
Svir09G0044750.1 Steroid CAS low borderline
Svir01G0007680.1 Steroid CPD/CYP90A1 low borderline
Svir01G0007680.2 Steroid CPD/CYP90A1 low borderline
Svir02G0022610.1 Steroid CPD/CYP90A1 medium borderline
Svir02G0045300.1 Steroid CPD/CYP90A1 medium borderline
Svir03G0028700.1 Steroid CPD/CYP90A1 low borderline
Svir03G0031830.1 Steroid CPD/CYP90A1 medium borderline
Svir03G0033290.1 Steroid CPD/CYP90A1 low borderline
Svir03G0041500.1 Steroid CPD/CYP90A1 low borderline
Svir05G0038540.1 Steroid CPD/CYP90A1 low borderline
Svir05G0038570.1 Steroid CPD/CYP90A1 low borderline
Svir05G0038580.1 Steroid CPD/CYP90A1 low borderline
Svir06G0006930.1 Steroid CPD/CYP90A1 medium borderline
Svir06G0020940.1 Steroid CPD/CYP90A1 medium borderline
Svir06G0027300.1 Steroid CPD/CYP90A1 medium borderline
Svir07G0023390.1 Steroid CPD/CYP90A1 low borderline
Svir07G0023400.1 Steroid CPD/CYP90A1 low borderline
Svir07G0023570.1 Steroid CPD/CYP90A1 low borderline
Svir07G0023570.2 Steroid CPD/CYP90A1 low borderline
Svir07G0023570.3 Steroid CPD/CYP90A1 low borderline
Svir07G0023570.4 Steroid CPD/CYP90A1 low borderline
Svir07G0035510.1 Steroid CPD/CYP90A1 low borderline
Svir08G0002700.1 Steroid CPD/CYP90A1 low borderline
Svir08G0010710.1 Steroid CPD/CYP90A1 low borderline
Svir08G0010710.2 Steroid CPD/CYP90A1 low borderline
Svir08G0010710.3 Steroid CPD/CYP90A1 low borderline
Svir08G0010710.4 Steroid CPD/CYP90A1 low borderline
Svir08G0012550.1 Steroid CPD/CYP90A1 low borderline
Svir08G0012550.2 Steroid CPD/CYP90A1 low borderline
Svir08G0012550.3 Steroid CPD/CYP90A1 low borderline
Svir08G0012550.4 Steroid CPD/CYP90A1 low borderline
Svir08G0012550.5 Steroid CPD/CYP90A1 low borderline
Svir08G0012550.6 Steroid CPD/CYP90A1 low borderline
Svir08G0012550.7 Steroid CPD/CYP90A1 low borderline