PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Svir07G0036460.1 Steroid DWF4/CYP90B1 low borderline
Svir08G0000360.1 Steroid DWF4/CYP90B1 medium borderline
Svir08G0003010.1 Steroid DWF4/CYP90B1 medium borderline
Svir08G0003710.1 Steroid DWF4/CYP90B1 low borderline
Svir08G0024070.1 Steroid DWF4/CYP90B1 low borderline
Svir08G0026900.1 Steroid DWF4/CYP90B1 low borderline
Svir08G0026910.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0001150.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0001240.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0001250.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0001270.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0001290.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0009210.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0009220.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0009230.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0009240.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0009280.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0019290.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0032880.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0040790.1 Steroid DWF4/CYP90B1 medium borderline
Svir09G0040790.2 Steroid DWF4/CYP90B1 medium borderline
Svir09G0040790.3 Steroid DWF4/CYP90B1 medium borderline
Svir09G0040790.4 Steroid DWF4/CYP90B1 medium borderline
Svir09G0040790.5 Steroid DWF4/CYP90B1 medium borderline
Svir09G0043110.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0043120.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0043130.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0043140.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0043150.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0043170.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0043360.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0043750.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0043770.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0046050.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0052880.1 Steroid DWF4/CYP90B1 medium borderline
Svir09G0052880.2 Steroid DWF4/CYP90B1 medium borderline
Svir09G0057990.1 Steroid DWF4/CYP90B1 low borderline
Svir09G0060100.1 Steroid DWF4/CYP90B1 low borderline
Svir01G0017610.1 Steroid DWF5 medium borderline
Svir05G0009790.1 Steroid DWF7 medium pass
Svir02G0015010.1 Steroid FK medium pass
Svir07G0009950.1 Steroid FK low borderline
Svir05G0007260.1 Steroid HYD1 high pass
Svir05G0007330.1 Steroid HYD1 high pass
Svir05G0007340.1 Steroid HYD1 high pass
Svir05G0007340.2 Steroid HYD1 high pass
Svir01G0030270.1 Steroid ROT3/CYP90C1 medium borderline
Svir01G0030270.2 Steroid ROT3/CYP90C1 medium borderline
Svir02G0010860.1 Steroid ROT3/CYP90C1 medium borderline
Svir03G0012700.2 Steroid ROT3/CYP90C1 medium borderline