PlantSME Plant secondary metabolism enzyme database

Sinapis alba (sinapis_alba)

Imported from atlas release summary for Sinapis alba.

2189
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 656 19 BAHD (311) View species results
Alkaloid pathway 517 19 SGD (95) View species results
Phenylpropanoid pathway 469 12 POD (231) View species results
Flavonoid pathway 223 8 UFGT (148) View species results
Steroid pathway 168 12 SMT1/SMT2/SMT3 (66) View species results
Rosmarinic acid pathway 156 7 C4H (68) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1999 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 419 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
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Gene Pathway Family Confidence Status Best Target
SalbSina_scaffold10400012840.1 Phenylpropanoid CCR low borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
SalbSina_scaffold1040010800.1 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
SalbSina_scaffold11660037700.1 Phenylpropanoid CCR medium borderline CCR__00008__sp_Q9S9N9_CCR1_ARATH
SalbSina_scaffold120043460.1 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
SalbSina_scaffold1300061350.1 Phenylpropanoid CCR medium borderline CCR__00004__sp_G7JEE5_CCR2_MEDTR
SalbSina_scaffold13820071870.1 Phenylpropanoid CCR medium borderline CCR__00004__sp_G7JEE5_CCR2_MEDTR
SalbSina_scaffold14240078250.1 Phenylpropanoid CCR medium pass CCR__00009__sp_Q9SAH9_CCR2_ARATH
SalbSina_scaffold1450081180.1 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
SalbSina_scaffold15330091320.1 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
SalbSina_scaffold1880135170.1 Phenylpropanoid CCR medium borderline CCR__00009__sp_Q9SAH9_CCR2_ARATH
SalbSina_scaffold1980147360.1 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
SalbSina_scaffold2080165620.1 Phenylpropanoid CCR low borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
SalbSina_scaffold20860166890.1 Phenylpropanoid CCR medium pass CCR__00009__sp_Q9SAH9_CCR2_ARATH
SalbSina_scaffold2100168310.1 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
SalbSina_scaffold22460181180.1 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
SalbSina_scaffold2380192330.1 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
SalbSina_scaffold3020244510.1 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
SalbSina_scaffold3300261680.1 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
SalbSina_scaffold3590276560.1 Phenylpropanoid CCR low borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
SalbSina_scaffold3600278880.1 Phenylpropanoid CCR medium borderline CCR__00008__sp_Q9S9N9_CCR1_ARATH
SalbSina_scaffold3710285230.1 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
SalbSina_scaffold4330316680.1 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
SalbSina_scaffold7610439080.1 Phenylpropanoid CCR medium borderline CCR__00009__sp_Q9SAH9_CCR2_ARATH
SalbSina_scaffold7700441150.1 Phenylpropanoid CCR medium pass CCR__00009__sp_Q9SAH9_CCR2_ARATH
SalbSina_scaffold7870445100.1 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
SalbSina_scaffold9220483070.1 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
SalbSina_scaffold9220483080.1 Phenylpropanoid CCR medium pass CCR__00007__sp_Q9CA28_TKPR2_ARATH