PlantSME Plant secondary metabolism enzyme database

Sinapis alba (sinapis_alba)

Imported from atlas release summary for Sinapis alba.

2189
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 656 19 BAHD (311) View species results
Alkaloid pathway 517 19 SGD (95) View species results
Phenylpropanoid pathway 469 12 POD (231) View species results
Flavonoid pathway 223 8 UFGT (148) View species results
Steroid pathway 168 12 SMT1/SMT2/SMT3 (66) View species results
Rosmarinic acid pathway 156 7 C4H (68) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1999 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 419 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
SalbSina_scaffold10260007130.1 Flavonoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
SalbSina_scaffold110022860.1 Flavonoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
SalbSina_scaffold15080088810.1 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
SalbSina_scaffold2010155750.1 Flavonoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
SalbSina_scaffold2760223300.1 Flavonoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
SalbSina_scaffold34690270380.1 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
SalbSina_scaffold4360317840.1 Flavonoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
SalbSina_scaffold54000364530.1 Flavonoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
SalbSina_scaffold810454500.1 Flavonoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
SalbSina_scaffold10260007130.1 Phenylpropanoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
SalbSina_scaffold110022860.1 Phenylpropanoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
SalbSina_scaffold15080088810.1 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
SalbSina_scaffold2010155750.1 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
SalbSina_scaffold2760223300.1 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
SalbSina_scaffold34690270380.1 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
SalbSina_scaffold4360317840.1 Phenylpropanoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
SalbSina_scaffold54000364530.1 Phenylpropanoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
SalbSina_scaffold810454500.1 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
SalbSina_scaffold10260007130.1 Rosmarinic Acid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
SalbSina_scaffold110022860.1 Rosmarinic Acid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
SalbSina_scaffold15080088810.1 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
SalbSina_scaffold2010155750.1 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
SalbSina_scaffold2760223300.1 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
SalbSina_scaffold34690270380.1 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
SalbSina_scaffold4360317840.1 Rosmarinic Acid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
SalbSina_scaffold54000364530.1 Rosmarinic Acid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
SalbSina_scaffold810454500.1 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH