PlantSME Plant secondary metabolism enzyme database

Sinapis alba (sinapis_alba)

Imported from atlas release summary for Sinapis alba.

2189
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 656 19 BAHD (311) View species results
Alkaloid pathway 517 19 SGD (95) View species results
Phenylpropanoid pathway 469 12 POD (231) View species results
Flavonoid pathway 223 8 UFGT (148) View species results
Steroid pathway 168 12 SMT1/SMT2/SMT3 (66) View species results
Rosmarinic acid pathway 156 7 C4H (68) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1999 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 419 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
SalbSina_scaffold10300008080.1 Alkaloid IO medium borderline
SalbSina_scaffold1080019060.1 Alkaloid IO medium borderline
SalbSina_scaffold110022720.1 Alkaloid IO medium borderline
SalbSina_scaffold11300028950.1 Alkaloid IO medium borderline
SalbSina_scaffold12150048650.1 Alkaloid IO medium borderline
SalbSina_scaffold12420053450.1 Alkaloid IO medium borderline
SalbSina_scaffold1290059240.1 Alkaloid IO high pass
SalbSina_scaffold12960060430.1 Alkaloid IO medium borderline
SalbSina_scaffold13320065780.1 Alkaloid IO medium borderline
SalbSina_scaffold16610108520.1 Alkaloid IO medium borderline
SalbSina_scaffold16650109050.1 Alkaloid IO medium borderline
SalbSina_scaffold18050124390.1 Alkaloid IO medium pass
SalbSina_scaffold1930141630.1 Alkaloid IO medium borderline
SalbSina_scaffold20151490.1 Alkaloid IO medium borderline
SalbSina_scaffold2260181910.1 Alkaloid IO medium pass
SalbSina_scaffold24360197140.2 Alkaloid IO low borderline
SalbSina_scaffold290232640.1 Alkaloid IO medium pass
SalbSina_scaffold290233100.1 Alkaloid IO medium borderline
SalbSina_scaffold3160252720.1 Alkaloid IO low borderline
SalbSina_scaffold3200256350.1 Alkaloid IO medium borderline
SalbSina_scaffold370284480.1 Alkaloid IO medium borderline
SalbSina_scaffold3770287570.1 Alkaloid IO medium borderline
SalbSina_scaffold4130307750.1 Alkaloid IO medium borderline
SalbSina_scaffold4230312140.1 Alkaloid IO medium pass
SalbSina_scaffold4310315940.1 Alkaloid IO medium borderline
SalbSina_scaffold45350327130.1 Alkaloid IO medium borderline
SalbSina_scaffold45580327860.1 Alkaloid IO medium borderline
SalbSina_scaffold4700334150.1 Alkaloid IO low borderline
SalbSina_scaffold5290359940.1 Alkaloid IO medium borderline
SalbSina_scaffold580377370.1 Alkaloid IO high pass
SalbSina_scaffold580377420.1 Alkaloid IO medium borderline
SalbSina_scaffold5880380080.1 Alkaloid IO medium borderline
SalbSina_scaffold59110380980.1 Alkaloid IO medium borderline
SalbSina_scaffold640400750.2 Alkaloid IO low borderline
SalbSina_scaffold6710410290.1 Alkaloid IO medium borderline
SalbSina_scaffold740429920.1 Alkaloid IO medium borderline
SalbSina_scaffold80449870.1 Alkaloid IO medium borderline
SalbSina_scaffold8440461660.1 Alkaloid IO medium borderline
SalbSina_scaffold940487560.1 Alkaloid IO medium pass