PlantSME Plant secondary metabolism enzyme database

Sinapis alba (sinapis_alba)

Imported from atlas release summary for Sinapis alba.

2189
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 656 19 BAHD (311) View species results
Alkaloid pathway 517 19 SGD (95) View species results
Phenylpropanoid pathway 469 12 POD (231) View species results
Flavonoid pathway 223 8 UFGT (148) View species results
Steroid pathway 168 12 SMT1/SMT2/SMT3 (66) View species results
Rosmarinic acid pathway 156 7 C4H (68) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1999 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 419 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status Best Target
SalbSina_scaffold10040003230.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold1070017280.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold1070017290.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold1070017310.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold1170038510.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold1170038520.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold12560054940.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold13790071160.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold14120077200.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold1560093850.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold1980147190.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold2060164350.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold2280183870.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold300241670.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold3010244150.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold3170253580.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold50346320.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold52170357750.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold580377000.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold5900380730.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold7510433320.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold7900446810.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold9130481230.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
SalbSina_scaffold9180481860.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA