PlantSME Plant secondary metabolism enzyme database

Sinapis alba (sinapis_alba)

Imported from atlas release summary for Sinapis alba.

2189
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 656 19 BAHD (311) View species results
Alkaloid pathway 517 19 SGD (95) View species results
Phenylpropanoid pathway 469 12 POD (231) View species results
Flavonoid pathway 223 8 UFGT (148) View species results
Steroid pathway 168 12 SMT1/SMT2/SMT3 (66) View species results
Rosmarinic acid pathway 156 7 C4H (68) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1999 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 419 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
SalbSina_scaffold1360068820.1 Alkaloid PMT low borderline
SalbSina_scaffold170112600.1 Alkaloid PMT low borderline
SalbSina_scaffold22080177870.1 Alkaloid PMT low borderline
SalbSina_scaffold2310187230.1 Alkaloid PMT low borderline
SalbSina_scaffold28060226670.1 Alkaloid PMT medium borderline
SalbSina_scaffold330261020.1 Alkaloid PMT medium borderline
SalbSina_scaffold330261020.2 Alkaloid PMT medium borderline
SalbSina_scaffold4790337640.1 Alkaloid PMT low borderline
SalbSina_scaffold5290359800.1 Alkaloid PMT low borderline
SalbSina_scaffold54510366040.1 Alkaloid PMT low borderline
SalbSina_scaffold6130390010.1 Alkaloid PMT medium borderline
SalbSina_scaffold6190391280.1 Alkaloid PMT medium borderline
SalbSina_scaffold6190391280.2 Alkaloid PMT medium borderline
SalbSina_scaffold630395940.1 Alkaloid PMT low borderline
SalbSina_scaffold80451800.1 Alkaloid PMT low borderline
SalbSina_scaffold820456830.1 Alkaloid PMT medium borderline
SalbSina_scaffold9090480000.1 Alkaloid PMT medium borderline
SalbSina_scaffold9230483390.1 Alkaloid PMT medium pass