PlantSME Plant secondary metabolism enzyme database

Sinapis alba (sinapis_alba)

Imported from atlas release summary for Sinapis alba.

2189
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 656 19 BAHD (311) View species results
Alkaloid pathway 517 19 SGD (95) View species results
Phenylpropanoid pathway 469 12 POD (231) View species results
Flavonoid pathway 223 8 UFGT (148) View species results
Steroid pathway 168 12 SMT1/SMT2/SMT3 (66) View species results
Rosmarinic acid pathway 156 7 C4H (68) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1999 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 419 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status
SalbSina_scaffold10790018740.1 Alkaloid LAMT medium borderline
SalbSina_scaffold1130028790.1 Alkaloid LAMT medium borderline
SalbSina_scaffold11730039340.1 Alkaloid LAMT medium borderline
SalbSina_scaffold1710114710.1 Alkaloid LAMT medium borderline
SalbSina_scaffold17360118680.1 Alkaloid LAMT medium borderline
SalbSina_scaffold1970144940.1 Alkaloid LAMT medium borderline
SalbSina_scaffold20151610.1 Alkaloid LAMT medium borderline
SalbSina_scaffold20151610.2 Alkaloid LAMT medium borderline
SalbSina_scaffold2360190420.1 Alkaloid LAMT medium borderline
SalbSina_scaffold2430196990.1 Alkaloid LAMT medium pass
SalbSina_scaffold2550209090.1 Alkaloid LAMT medium borderline
SalbSina_scaffold25910212000.1 Alkaloid LAMT medium borderline
SalbSina_scaffold290233270.1 Alkaloid LAMT medium borderline
SalbSina_scaffold290233280.1 Alkaloid LAMT medium borderline
SalbSina_scaffold3000243080.1 Alkaloid LAMT medium borderline
SalbSina_scaffold3000243130.1 Alkaloid LAMT medium borderline
SalbSina_scaffold3000243160.1 Alkaloid LAMT medium borderline
SalbSina_scaffold3270259720.1 Alkaloid LAMT medium borderline
SalbSina_scaffold3270259730.1 Alkaloid LAMT medium borderline
SalbSina_scaffold3270259750.1 Alkaloid LAMT medium borderline
SalbSina_scaffold3270259790.1 Alkaloid LAMT medium borderline
SalbSina_scaffold390297000.1 Alkaloid LAMT medium borderline
SalbSina_scaffold430314600.1 Alkaloid LAMT medium pass
SalbSina_scaffold6090388320.1 Alkaloid LAMT low borderline
SalbSina_scaffold6230393650.1 Alkaloid LAMT medium borderline
SalbSina_scaffold7050418640.1 Alkaloid LAMT medium borderline
SalbSina_scaffold7220424200.1 Alkaloid LAMT medium borderline
SalbSina_scaffold8270458420.1 Alkaloid LAMT medium borderline
SalbSina_scaffold9370486700.1 Alkaloid LAMT medium borderline