PlantSME Plant secondary metabolism enzyme database

Sinapis alba (sinapis_alba)

Imported from atlas release summary for Sinapis alba.

2189
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 656 19 BAHD (311) View species results
Alkaloid pathway 517 19 SGD (95) View species results
Phenylpropanoid pathway 469 12 POD (231) View species results
Flavonoid pathway 223 8 UFGT (148) View species results
Steroid pathway 168 12 SMT1/SMT2/SMT3 (66) View species results
Rosmarinic acid pathway 156 7 C4H (68) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1999 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 419 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status Best Target
SalbSina_scaffold170112600.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
SalbSina_scaffold1850128880.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
SalbSina_scaffold1880134090.1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
SalbSina_scaffold2310187230.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SalbSina_scaffold23460189330.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
SalbSina_scaffold250202370.1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
SalbSina_scaffold3470270440.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SalbSina_scaffold3770287840.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SalbSina_scaffold3830292270.1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
SalbSina_scaffold4620330810.1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
SalbSina_scaffold4790337640.1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
SalbSina_scaffold50346090.1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
SalbSina_scaffold5700374470.1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
SalbSina_scaffold5730375360.1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
SalbSina_scaffold630395940.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SalbSina_scaffold6340398440.1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
SalbSina_scaffold6340398570.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
SalbSina_scaffold730427090.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
SalbSina_scaffold7340428430.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
SalbSina_scaffold80450370.1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
SalbSina_scaffold8720469510.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SalbSina_scaffold8800472070.1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC