PlantSME Plant secondary metabolism enzyme database

Sinapis alba (sinapis_alba)

Imported from atlas release summary for Sinapis alba.

2189
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 656 19 BAHD (311) View species results
Alkaloid pathway 517 19 SGD (95) View species results
Phenylpropanoid pathway 469 12 POD (231) View species results
Flavonoid pathway 223 8 UFGT (148) View species results
Steroid pathway 168 12 SMT1/SMT2/SMT3 (66) View species results
Rosmarinic acid pathway 156 7 C4H (68) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1999 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 419 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
SalbSina_scaffold20151070.1 Flavonoid F3H medium borderline
SalbSina_scaffold2060164350.1 Flavonoid F3H medium borderline
SalbSina_scaffold21200171050.1 Flavonoid F3H low borderline
SalbSina_scaffold21510173200.1 Flavonoid F3H medium borderline
SalbSina_scaffold22080177890.1 Flavonoid F3H low borderline
SalbSina_scaffold22080177900.1 Flavonoid F3H low borderline
SalbSina_scaffold22330180180.1 Flavonoid F3H medium borderline
SalbSina_scaffold230185550.1 Flavonoid F3H medium borderline
SalbSina_scaffold23360188570.1 Flavonoid F3H medium borderline
SalbSina_scaffold2370192080.1 Flavonoid F3H medium borderline
SalbSina_scaffold2380192690.1 Flavonoid F3H medium borderline
SalbSina_scaffold2410194710.1 Flavonoid F3H medium borderline
SalbSina_scaffold250202030.1 Flavonoid F3H medium borderline
SalbSina_scaffold250203220.1 Flavonoid F3H medium borderline
SalbSina_scaffold2540207830.1 Flavonoid F3H medium borderline
SalbSina_scaffold25620210050.1 Flavonoid F3H medium borderline
SalbSina_scaffold260212500.1 Flavonoid F3H medium borderline
SalbSina_scaffold2660216500.1 Flavonoid F3H low borderline
SalbSina_scaffold270219450.1 Flavonoid F3H low borderline
SalbSina_scaffold27130220690.1 Flavonoid F3H medium borderline
SalbSina_scaffold2940237220.1 Flavonoid F3H medium borderline
SalbSina_scaffold29720238960.1 Flavonoid F3H medium borderline
SalbSina_scaffold300241670.1 Flavonoid F3H medium borderline
SalbSina_scaffold300241850.1 Flavonoid F3H medium borderline
SalbSina_scaffold3010244150.1 Flavonoid F3H low borderline
SalbSina_scaffold30240840.1 Flavonoid F3H medium borderline
SalbSina_scaffold3050245990.1 Flavonoid F3H medium borderline
SalbSina_scaffold3130251020.1 Flavonoid F3H low borderline
SalbSina_scaffold3170253580.1 Flavonoid F3H medium borderline
SalbSina_scaffold320255190.1 Flavonoid F3H low borderline
SalbSina_scaffold3230258210.1 Flavonoid F3H medium pass
SalbSina_scaffold33510264170.1 Flavonoid F3H medium borderline
SalbSina_scaffold34290269500.1 Flavonoid F3H medium borderline
SalbSina_scaffold3500272140.1 Flavonoid F3H medium borderline
SalbSina_scaffold3600278650.1 Flavonoid F3H medium borderline
SalbSina_scaffold360278600.1 Flavonoid F3H medium borderline
SalbSina_scaffold36300280120.1 Flavonoid F3H medium borderline
SalbSina_scaffold3700284800.1 Flavonoid F3H medium borderline
SalbSina_scaffold38100290230.1 Flavonoid F3H medium borderline
SalbSina_scaffold3840293200.1 Flavonoid F3H medium borderline
SalbSina_scaffold390295830.1 Flavonoid F3H medium borderline
SalbSina_scaffold390295840.1 Flavonoid F3H medium borderline
SalbSina_scaffold390295840.2 Flavonoid F3H medium borderline
SalbSina_scaffold400302360.1 Flavonoid F3H low borderline
SalbSina_scaffold4070305530.1 Flavonoid F3H medium borderline
SalbSina_scaffold41980310450.1 Flavonoid F3H medium borderline
SalbSina_scaffold430315420.1 Flavonoid F3H medium borderline
SalbSina_scaffold430315480.1 Flavonoid F3H medium borderline
SalbSina_scaffold4310315860.1 Flavonoid F3H medium borderline
SalbSina_scaffold4800338710.1 Flavonoid F3H medium borderline