PlantSME Plant secondary metabolism enzyme database

Sinapis alba (sinapis_alba)

Imported from atlas release summary for Sinapis alba.

2189
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 656 19 BAHD (311) View species results
Alkaloid pathway 517 19 SGD (95) View species results
Phenylpropanoid pathway 469 12 POD (231) View species results
Flavonoid pathway 223 8 UFGT (148) View species results
Steroid pathway 168 12 SMT1/SMT2/SMT3 (66) View species results
Rosmarinic acid pathway 156 7 C4H (68) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1999 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 419 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
SalbSina_scaffold36500281440.1 Alkaloid T3O medium pass
SalbSina_scaffold3770287580.1 Alkaloid T3O medium borderline
SalbSina_scaffold3800289600.1 Alkaloid T3O medium borderline
SalbSina_scaffold3800289610.1 Alkaloid T3O medium borderline
SalbSina_scaffold3890295220.1 Alkaloid T3O medium pass
SalbSina_scaffold3890295470.1 Alkaloid T3O medium borderline
SalbSina_scaffold4310316020.1 Alkaloid T3O medium borderline
SalbSina_scaffold4360317850.1 Alkaloid T3O medium borderline
SalbSina_scaffold4390319290.1 Alkaloid T3O medium borderline
SalbSina_scaffold4390319300.1 Alkaloid T3O medium borderline
SalbSina_scaffold44760323040.1 Alkaloid T3O medium borderline
SalbSina_scaffold4620330710.1 Alkaloid T3O medium pass
SalbSina_scaffold4700334140.1 Alkaloid T3O medium borderline
SalbSina_scaffold4770336790.1 Alkaloid T3O medium borderline
SalbSina_scaffold5030351440.1 Alkaloid T3O medium pass
SalbSina_scaffold50345970.1 Alkaloid T3O medium borderline
SalbSina_scaffold5140355270.1 Alkaloid T3O medium borderline
SalbSina_scaffold5440365850.1 Alkaloid T3O medium borderline
SalbSina_scaffold5460366120.1 Alkaloid T3O medium borderline
SalbSina_scaffold5460366120.2 Alkaloid T3O medium borderline
SalbSina_scaffold5460366130.1 Alkaloid T3O medium borderline
SalbSina_scaffold5460366130.2 Alkaloid T3O medium borderline
SalbSina_scaffold5460366140.1 Alkaloid T3O medium borderline
SalbSina_scaffold5460366150.1 Alkaloid T3O medium borderline
SalbSina_scaffold5460366160.1 Alkaloid T3O medium borderline
SalbSina_scaffold5460366180.1 Alkaloid T3O medium borderline
SalbSina_scaffold56610373060.1 Alkaloid T3O medium pass
SalbSina_scaffold580377630.1 Alkaloid T3O low borderline
SalbSina_scaffold5850378850.1 Alkaloid T3O medium pass
SalbSina_scaffold5880380090.1 Alkaloid T3O medium borderline
SalbSina_scaffold60010386230.1 Alkaloid T3O medium borderline
SalbSina_scaffold6260394480.1 Alkaloid T3O medium borderline
SalbSina_scaffold6280394910.1 Alkaloid T3O medium borderline
SalbSina_scaffold6280395140.1 Alkaloid T3O medium pass
SalbSina_scaffold640400750.1 Alkaloid T3O medium pass
SalbSina_scaffold6710410280.1 Alkaloid T3O medium borderline
SalbSina_scaffold690414810.1 Alkaloid T3O medium pass
SalbSina_scaffold69430416250.1 Alkaloid T3O medium borderline
SalbSina_scaffold7100420360.1 Alkaloid T3O medium pass
SalbSina_scaffold720423030.1 Alkaloid T3O medium pass
SalbSina_scaffold7360428830.1 Alkaloid T3O medium pass
SalbSina_scaffold740429760.1 Alkaloid T3O low borderline
SalbSina_scaffold7560434250.1 Alkaloid T3O medium pass
SalbSina_scaffold760436330.1 Alkaloid T3O low borderline
SalbSina_scaffold760437780.1 Alkaloid T3O medium pass
SalbSina_scaffold760438370.1 Alkaloid T3O medium borderline
SalbSina_scaffold7640439550.1 Alkaloid T3O medium borderline
SalbSina_scaffold780443110.1 Alkaloid T3O medium borderline
SalbSina_scaffold7980448690.1 Alkaloid T3O low borderline
SalbSina_scaffold80449880.1 Alkaloid T3O medium borderline