Sinapis alba (sinapis_alba)
Imported from atlas release summary for Sinapis alba.
2666
Candidate Protein Records
2189
Pathway-Level Records
5244
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5244
Family-Level Calls
BAHD
6.86%
C4H
6.18%
C3'H/CYP98A
6.01%
POD
4.52%
CYP76
3.87%
IFS
3.76%
4CL
3.38%
F3H
3.11%
Other Families
62.32%
More Families (96)
UGT
161
3.07%
T3O
157
2.99%
UFGT
155
2.96%
7DLGT
153
2.92%
DWF4/CYP90B1
148
2.82%
NMT
140
2.67%
F3'H/CYP75B
102
1.95%
SGD
100
1.91%
BR6OX2/CYP85A2
99
1.89%
SMT1/SMT2/SMT3
97
1.85%
STR
94
1.79%
CODM/T6ODM
91
1.74%
TRI/TRII
84
1.6%
H6H
76
1.45%
CYP71
76
1.45%
CSE
62
1.18%
CAS
59
1.13%
CAD
55
1.05%
T16H
52
0.99%
PYKS
50
0.95%
IFR
50
0.95%
TPS
47
0.9%
SLS
46
0.88%
COMT
46
0.88%
BBE
43
0.82%
GES
41
0.78%
ANR
41
0.78%
CYP90D1
41
0.78%
IO
39
0.74%
LAC
39
0.74%
RAS
37
0.71%
G8O/G8H
31
0.59%
FNS
31
0.59%
16OMT
30
0.57%
LAMT
29
0.55%
F5H/CYP84A
29
0.55%
PAL
27
0.51%
CCR
27
0.51%
TAT
27
0.51%
NCS
24
0.46%
GS
24
0.46%
HCT
22
0.42%
CYP51G1
21
0.4%
F3'5'H/CYP75A
20
0.38%
BR6OX1/CYP85A1
20
0.38%
8HGO
19
0.36%
7DLH
19
0.36%
CPD/CYP90A1
19
0.36%
ROT3/CYP90C1
19
0.36%
PMT
18
0.34%
ANS/LDOX
18
0.34%
CCoAOMT
17
0.32%
CPR
17
0.32%
FPPS
17
0.32%
SQE
16
0.31%
SQS/FDFT1
15
0.29%
GGPPS
15
0.29%
MPO
14
0.27%
CNMT
13
0.25%
AACT
13
0.25%
COR
12
0.23%
CHS
11
0.21%
SMO1/SMO2
11
0.21%
CYP719
9
0.17%
MVD
9
0.17%
ISY
7
0.13%
CYP80B1
7
0.13%
ADC
7
0.13%
DFR
7
0.13%
DWF7
7
0.13%
TDC
6
0.11%
CYP80F1
6
0.11%
TYDC_DDC
6
0.11%
DET2
6
0.11%
MCT/IspD
6
0.11%
IDI
5
0.1%
MVK
5
0.1%
HPPR
4
0.08%
FK
4
0.08%
CPI1
4
0.08%
DXS
4
0.08%
XMT_MXMT_DXMT
3
0.06%
CHI
3
0.06%
HYD1
3
0.06%
DWF1
3
0.06%
HMGR
3
0.06%
MDS/IspF
3
0.06%
DXR
3
0.06%
PMK
3
0.06%
DWF5
2
0.04%
HMGS
2
0.04%
ODC
1
0.02%
FLS
1
0.02%
HDS/IspG
1
0.02%
CMK/IspE
1
0.02%
HDR/IspH
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 656 | 19 | BAHD (311) | View species results |
| Alkaloid pathway | 517 | 19 | SGD (95) | View species results |
| Phenylpropanoid pathway | 469 | 12 | POD (231) | View species results |
| Flavonoid pathway | 223 | 8 | UFGT (148) | View species results |
| Steroid pathway | 168 | 12 | SMT1/SMT2/SMT3 (66) | View species results |
| Rosmarinic acid pathway | 156 | 7 | C4H (68) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1999 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 419 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| SalbSina_scaffold22540181770.1 | Steroid | CYP90D1 | medium | borderline |
| SalbSina_scaffold2350189520.1 | Steroid | CYP90D1 | low | borderline |
| SalbSina_scaffold2350189830.1 | Steroid | CYP90D1 | low | borderline |
| SalbSina_scaffold24060194430.1 | Steroid | CYP90D1 | medium | borderline |
| SalbSina_scaffold2820227580.1 | Steroid | CYP90D1 | low | borderline |
| SalbSina_scaffold290232360.1 | Steroid | CYP90D1 | medium | borderline |
| SalbSina_scaffold2940237150.1 | Steroid | CYP90D1 | low | borderline |
| SalbSina_scaffold3050246060.1 | Steroid | CYP90D1 | medium | borderline |
| SalbSina_scaffold3390266490.1 | Steroid | CYP90D1 | medium | borderline |
| SalbSina_scaffold34490270000.1 | Steroid | CYP90D1 | medium | borderline |
| SalbSina_scaffold3800289600.1 | Steroid | CYP90D1 | low | borderline |
| SalbSina_scaffold3800289610.1 | Steroid | CYP90D1 | low | borderline |
| SalbSina_scaffold4310315950.1 | Steroid | CYP90D1 | low | borderline |
| SalbSina_scaffold4390319290.1 | Steroid | CYP90D1 | low | borderline |
| SalbSina_scaffold450324380.1 | Steroid | CYP90D1 | low | borderline |
| SalbSina_scaffold5460366140.1 | Steroid | CYP90D1 | low | borderline |
| SalbSina_scaffold56610373060.1 | Steroid | CYP90D1 | medium | borderline |
| SalbSina_scaffold5880380060.1 | Steroid | CYP90D1 | low | borderline |
| SalbSina_scaffold640400750.1 | Steroid | CYP90D1 | medium | borderline |
| SalbSina_scaffold640400750.2 | Steroid | CYP90D1 | medium | borderline |
| SalbSina_scaffold7100420360.1 | Steroid | CYP90D1 | medium | borderline |
| SalbSina_scaffold7210423920.1 | Steroid | CYP90D1 | low | borderline |
| SalbSina_scaffold8560465550.1 | Steroid | CYP90D1 | medium | borderline |
| SalbSina_scaffold9110480940.1 | Steroid | CYP90D1 | low | borderline |
| SalbSina_scaffold9840495320.1 | Steroid | CYP90D1 | medium | borderline |
| SalbSina_scaffold2010156850.1 | Steroid | DET2 | low | borderline |
| SalbSina_scaffold4760336520.1 | Steroid | DET2 | low | borderline |
| SalbSina_scaffold4760336520.2 | Steroid | DET2 | low | borderline |
| SalbSina_scaffold760437960.1 | Steroid | DET2 | low | borderline |
| SalbSina_scaffold760437960.2 | Steroid | DET2 | low | borderline |
| SalbSina_scaffold810455170.1 | Steroid | DET2 | medium | pass |
| SalbSina_scaffold20570163890.1 | Steroid | DWF1 | medium | pass |
| SalbSina_scaffold8730469650.1 | Steroid | DWF1 | medium | pass |
| SalbSina_scaffold8730469650.2 | Steroid | DWF1 | medium | pass |
| SalbSina_scaffold10000920.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| SalbSina_scaffold10300008080.1 | Steroid | DWF4/CYP90B1 | medium | borderline |
| SalbSina_scaffold10330008470.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| SalbSina_scaffold1040011360.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| SalbSina_scaffold10530014500.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| SalbSina_scaffold10930021940.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| SalbSina_scaffold110022720.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| SalbSina_scaffold1120027710.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| SalbSina_scaffold11300028950.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| SalbSina_scaffold11300028970.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| SalbSina_scaffold1140030340.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| SalbSina_scaffold1140030350.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| SalbSina_scaffold1140030360.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| SalbSina_scaffold1240053160.1 | Steroid | DWF4/CYP90B1 | medium | borderline |
| SalbSina_scaffold1290059500.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| SalbSina_scaffold12930060210.1 | Steroid | DWF4/CYP90B1 | low | borderline |