PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_11180059070 Phenylpropanoid PAL medium pass
Srurcontig_2030101220 Phenylpropanoid PAL high pass
Srurcontig_3040143500 Phenylpropanoid PAL high pass
Srurcontig_3040143520 Phenylpropanoid PAL high pass
Srurcontig_3060145730 Phenylpropanoid PAL high pass
Srurcontig_3060146040 Phenylpropanoid PAL high pass
Srurcontig_3060146050 Phenylpropanoid PAL high pass
Srurcontig_3060146130 Phenylpropanoid PAL high pass
Srurcontig_3350162420 Phenylpropanoid PAL high pass
Srurcontig_3780184190 Phenylpropanoid PAL high pass
Srurcontig_5080248690 Phenylpropanoid PAL high pass
Srurcontig_5080248710 Phenylpropanoid PAL medium pass
Srurcontig_5080248720 Phenylpropanoid PAL high pass
Srurcontig_5080248780 Phenylpropanoid PAL high pass
Srurcontig_5410271260 Phenylpropanoid PAL high pass
Srurcontig_5410271280 Phenylpropanoid PAL high pass
Srurcontig_5520278320 Phenylpropanoid PAL medium pass
Srurcontig_5520278330 Phenylpropanoid PAL medium pass
Srurcontig_5670291270 Phenylpropanoid PAL low borderline
Srurcontig_6070306250 Phenylpropanoid PAL medium pass
Srurcontig_6070306260 Phenylpropanoid PAL medium pass
Srurcontig_6580337220 Phenylpropanoid PAL high pass
Srurcontig_6580337280 Phenylpropanoid PAL high pass
Srurcontig_70350890 Phenylpropanoid PAL medium pass
Srurcontig_7570379040 Phenylpropanoid PAL low borderline
Srurcontig_8140419340 Phenylpropanoid PAL high pass
Srurcontig_850435620 Phenylpropanoid PAL medium pass
Srurcontig_9150471080 Phenylpropanoid PAL high pass
Srurcontig_9360479910 Phenylpropanoid PAL high pass
Srurcontig_10000000650 Phenylpropanoid POD medium pass
Srurcontig_10040004640 Phenylpropanoid POD medium pass
Srurcontig_10160010370 Phenylpropanoid POD low borderline
Srurcontig_10190011710 Phenylpropanoid POD medium pass
Srurcontig_10210012520 Phenylpropanoid POD medium pass
Srurcontig_1030016350 Phenylpropanoid POD medium pass
Srurcontig_10630024530 Phenylpropanoid POD medium pass
Srurcontig_10630024820 Phenylpropanoid POD medium pass
Srurcontig_10680026740 Phenylpropanoid POD medium pass
Srurcontig_10840038060 Phenylpropanoid POD medium pass
Srurcontig_10920041620 Phenylpropanoid POD medium pass
Srurcontig_11170053250 Phenylpropanoid POD medium pass
Srurcontig_11180058060 Phenylpropanoid POD medium pass
Srurcontig_11180059310 Phenylpropanoid POD medium pass
Srurcontig_1210064320 Phenylpropanoid POD medium pass
Srurcontig_1220065320 Phenylpropanoid POD medium pass
Srurcontig_1220065350 Phenylpropanoid POD medium pass
Srurcontig_1290067340 Phenylpropanoid POD medium pass
Srurcontig_1310068870 Phenylpropanoid POD medium pass
Srurcontig_1340069470 Phenylpropanoid POD medium pass
Srurcontig_1380071310 Phenylpropanoid POD medium pass