PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_10820037750 Phenylpropanoid HCT low borderline
Srurcontig_2170108720 Phenylpropanoid HCT medium pass
Srurcontig_2300114090 Phenylpropanoid HCT medium pass
Srurcontig_2710131200 Phenylpropanoid HCT medium pass
Srurcontig_3520174050 Phenylpropanoid HCT medium pass
Srurcontig_4560226320 Phenylpropanoid HCT low borderline
Srurcontig_6160309790 Phenylpropanoid HCT medium pass
Srurcontig_6270315980 Phenylpropanoid HCT low borderline
Srurcontig_6540336210 Phenylpropanoid HCT medium pass
Srurcontig_8140418770 Phenylpropanoid HCT medium pass
Srurcontig_8780450020 Phenylpropanoid HCT medium pass
Srurcontig_9000459750 Phenylpropanoid HCT medium pass
Srurcontig_9080465260 Phenylpropanoid HCT medium pass
Srurcontig_9620486780 Phenylpropanoid HCT medium pass
Srurcontig_970489690 Phenylpropanoid HCT medium pass
Srurcontig_10040004610 Phenylpropanoid LAC medium pass
Srurcontig_10650025330 Phenylpropanoid LAC low borderline
Srurcontig_1070028020 Phenylpropanoid LAC medium pass
Srurcontig_11050046600 Phenylpropanoid LAC low borderline
Srurcontig_11110049180 Phenylpropanoid LAC medium pass
Srurcontig_1420074460 Phenylpropanoid LAC medium pass
Srurcontig_2290112980 Phenylpropanoid LAC medium pass
Srurcontig_2400117440 Phenylpropanoid LAC low borderline
Srurcontig_300142100 Phenylpropanoid LAC medium pass
Srurcontig_3360164520 Phenylpropanoid LAC medium pass
Srurcontig_3370164900 Phenylpropanoid LAC medium pass
Srurcontig_4090203080 Phenylpropanoid LAC low borderline
Srurcontig_4360215220 Phenylpropanoid LAC medium pass
Srurcontig_4390218200 Phenylpropanoid LAC low borderline
Srurcontig_6070305490 Phenylpropanoid LAC medium pass
Srurcontig_6090306710 Phenylpropanoid LAC medium pass
Srurcontig_6370327030 Phenylpropanoid LAC low borderline
Srurcontig_6580338360 Phenylpropanoid LAC medium pass
Srurcontig_6640340810 Phenylpropanoid LAC low borderline
Srurcontig_7150356290 Phenylpropanoid LAC medium pass
Srurcontig_8420428850 Phenylpropanoid LAC low borderline
Srurcontig_8530438630 Phenylpropanoid LAC low borderline
Srurcontig_930477560 Phenylpropanoid LAC medium pass
Srurcontig_930477590 Phenylpropanoid LAC medium pass
Srurcontig_9450482500 Phenylpropanoid LAC medium pass
Srurcontig_950483720 Phenylpropanoid LAC medium pass
Srurcontig_9760492910 Phenylpropanoid LAC medium pass
Srurcontig_10150009590 Phenylpropanoid PAL high pass
Srurcontig_10150009680 Phenylpropanoid PAL high pass
Srurcontig_10390018490 Phenylpropanoid PAL high pass
Srurcontig_10390018530 Phenylpropanoid PAL high pass
Srurcontig_10390018590 Phenylpropanoid PAL high pass
Srurcontig_10390018660 Phenylpropanoid PAL high pass
Srurcontig_10920041600 Phenylpropanoid PAL high pass
Srurcontig_11180059000 Phenylpropanoid PAL low borderline