PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_3910196070 Phenylpropanoid COMT medium pass
Srurcontig_3990199460 Phenylpropanoid COMT medium pass
Srurcontig_4270209010 Phenylpropanoid COMT medium pass
Srurcontig_4610231830 Phenylpropanoid COMT low borderline
Srurcontig_7030351950 Phenylpropanoid COMT medium pass
Srurcontig_7560376810 Phenylpropanoid COMT medium pass
Srurcontig_7560377540 Phenylpropanoid COMT medium pass
Srurcontig_7560377550 Phenylpropanoid COMT medium pass
Srurcontig_7560377630 Phenylpropanoid COMT medium pass
Srurcontig_7570379250 Phenylpropanoid COMT medium pass
Srurcontig_7590386530 Phenylpropanoid COMT medium pass
Srurcontig_7590387010 Phenylpropanoid COMT low borderline
Srurcontig_8180420430 Phenylpropanoid COMT medium pass
Srurcontig_8640445500 Phenylpropanoid COMT low borderline
Srurcontig_8640445510 Phenylpropanoid COMT medium pass
Srurcontig_8640445540 Phenylpropanoid COMT medium pass
Srurcontig_8900455180 Phenylpropanoid COMT medium pass
Srurcontig_9790496130 Phenylpropanoid COMT medium pass
Srurcontig_10390018160 Phenylpropanoid CSE medium pass
Srurcontig_10650025320 Phenylpropanoid CSE low borderline
Srurcontig_1760084910 Phenylpropanoid CSE medium pass
Srurcontig_2030101870 Phenylpropanoid CSE medium pass
Srurcontig_2290112960 Phenylpropanoid CSE low borderline
Srurcontig_3860186780 Phenylpropanoid CSE medium pass
Srurcontig_4270208930 Phenylpropanoid CSE medium pass
Srurcontig_4370215270 Phenylpropanoid CSE medium pass
Srurcontig_4920243580 Phenylpropanoid CSE medium pass
Srurcontig_5430274590 Phenylpropanoid CSE medium pass
Srurcontig_7680391940 Phenylpropanoid CSE medium pass
Srurcontig_8330425830 Phenylpropanoid CSE medium pass
Srurcontig_8340426450 Phenylpropanoid CSE medium pass
Srurcontig_860444690 Phenylpropanoid CSE medium pass
Srurcontig_8650446630 Phenylpropanoid CSE medium pass
Srurcontig_8790450450 Phenylpropanoid CSE medium pass
Srurcontig_9760493700 Phenylpropanoid CSE medium pass
Srurcontig_10560023030 Phenylpropanoid F5H/CYP84A medium borderline
Srurcontig_10880039670 Phenylpropanoid F5H/CYP84A medium borderline
Srurcontig_2070105740 Phenylpropanoid F5H/CYP84A medium borderline
Srurcontig_2400118440 Phenylpropanoid F5H/CYP84A medium borderline
Srurcontig_3270157940 Phenylpropanoid F5H/CYP84A medium borderline
Srurcontig_3400165600 Phenylpropanoid F5H/CYP84A low borderline
Srurcontig_3490169890 Phenylpropanoid F5H/CYP84A medium borderline
Srurcontig_5350264050 Phenylpropanoid F5H/CYP84A medium borderline
Srurcontig_5590285780 Phenylpropanoid F5H/CYP84A medium borderline
Srurcontig_7260359310 Phenylpropanoid F5H/CYP84A medium borderline
Srurcontig_7970407480 Phenylpropanoid F5H/CYP84A medium borderline
Srurcontig_9300478340 Phenylpropanoid F5H/CYP84A medium borderline
Srurcontig_930476190 Phenylpropanoid F5H/CYP84A medium borderline
Srurcontig_10490021580 Phenylpropanoid HCT low borderline
Srurcontig_1080037120 Phenylpropanoid HCT medium pass