PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_3910193830 Phenylpropanoid CAD medium borderline
Srurcontig_3910193840 Phenylpropanoid CAD medium borderline
Srurcontig_3910197670 Phenylpropanoid CAD medium borderline
Srurcontig_4470220410 Phenylpropanoid CAD medium borderline
Srurcontig_450223650 Phenylpropanoid CAD medium pass
Srurcontig_450223660 Phenylpropanoid CAD medium pass
Srurcontig_4710237470 Phenylpropanoid CAD medium pass
Srurcontig_5660289390 Phenylpropanoid CAD medium pass
Srurcontig_5990302510 Phenylpropanoid CAD medium borderline
Srurcontig_60302990 Phenylpropanoid CAD medium pass
Srurcontig_6170310560 Phenylpropanoid CAD low borderline
Srurcontig_7050352550 Phenylpropanoid CAD medium borderline
Srurcontig_7060353100 Phenylpropanoid CAD medium borderline
Srurcontig_780396730 Phenylpropanoid CAD low borderline
Srurcontig_8820451400 Phenylpropanoid CAD medium borderline
Srurcontig_8880454310 Phenylpropanoid CAD low borderline
Srurcontig_9130468400 Phenylpropanoid CAD medium borderline
Srurcontig_9190474440 Phenylpropanoid CAD medium pass
Srurcontig_9190474450 Phenylpropanoid CAD medium pass
Srurcontig_9190474460 Phenylpropanoid CAD medium pass
Srurcontig_9190474470 Phenylpropanoid CAD medium pass
Srurcontig_10390018190 Phenylpropanoid CCR low borderline
Srurcontig_1900091990 Phenylpropanoid CCR medium borderline
Srurcontig_4880241960 Phenylpropanoid CCR low borderline
Srurcontig_5080250020 Phenylpropanoid CCR low borderline
Srurcontig_7340362000 Phenylpropanoid CCR medium borderline
Srurcontig_7590386620 Phenylpropanoid CCR low borderline
Srurcontig_8110416780 Phenylpropanoid CCR medium borderline
Srurcontig_10030003080 Phenylpropanoid CCoAOMT low borderline
Srurcontig_1080036420 Phenylpropanoid CCoAOMT low borderline
Srurcontig_2030100730 Phenylpropanoid CCoAOMT low borderline
Srurcontig_2030100760 Phenylpropanoid CCoAOMT low borderline
Srurcontig_2750132910 Phenylpropanoid CCoAOMT low borderline
Srurcontig_4340212420 Phenylpropanoid CCoAOMT medium pass
Srurcontig_5810297270 Phenylpropanoid CCoAOMT low borderline
Srurcontig_5810297280 Phenylpropanoid CCoAOMT low borderline
Srurcontig_7600389760 Phenylpropanoid CCoAOMT low borderline
Srurcontig_8480431730 Phenylpropanoid CCoAOMT medium pass
Srurcontig_9450482370 Phenylpropanoid CCoAOMT medium pass
Srurcontig_10840037910 Phenylpropanoid COMT medium pass
Srurcontig_11120050420 Phenylpropanoid COMT low borderline
Srurcontig_11120050450 Phenylpropanoid COMT medium pass
Srurcontig_1400071910 Phenylpropanoid COMT low borderline
Srurcontig_2030103200 Phenylpropanoid COMT low borderline
Srurcontig_2030104190 Phenylpropanoid COMT low borderline
Srurcontig_3350161640 Phenylpropanoid COMT low borderline
Srurcontig_3350163570 Phenylpropanoid COMT medium pass
Srurcontig_3350163690 Phenylpropanoid COMT medium pass
Srurcontig_3500172440 Phenylpropanoid COMT low borderline
Srurcontig_3500172490 Phenylpropanoid COMT low borderline