PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1236
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Srurcontig_9260475340 Phenylpropanoid C3'H/CYP98A low borderline
Srurcontig_9300478310 Phenylpropanoid C3'H/CYP98A medium borderline
Srurcontig_9300478320 Phenylpropanoid C3'H/CYP98A low borderline
Srurcontig_930476900 Phenylpropanoid C3'H/CYP98A medium borderline
Srurcontig_950483620 Phenylpropanoid C3'H/CYP98A medium pass
Srurcontig_9540484520 Phenylpropanoid C3'H/CYP98A low borderline
Srurcontig_9540484530 Phenylpropanoid C3'H/CYP98A low borderline
Srurcontig_9540484540 Phenylpropanoid C3'H/CYP98A low borderline
Srurcontig_9670488630 Phenylpropanoid C3'H/CYP98A medium borderline
Srurcontig_9700491570 Phenylpropanoid C3'H/CYP98A medium borderline
Srurcontig_9800496530 Phenylpropanoid C3'H/CYP98A medium pass
Srurcontig_9800496680 Phenylpropanoid C3'H/CYP98A medium borderline
Srurcontig_9870498940 Phenylpropanoid C3'H/CYP98A medium borderline
Srurcontig_9870499020 Phenylpropanoid C3'H/CYP98A medium borderline
Srurcontig_9870499420 Phenylpropanoid C3'H/CYP98A medium borderline
Srurcontig_9920501410 Phenylpropanoid C3'H/CYP98A low borderline
Srurcontig_9980503850 Phenylpropanoid C3'H/CYP98A medium borderline
Srurcontig_9980504260 Phenylpropanoid C3'H/CYP98A low borderline
Srurcontig_9980504410 Phenylpropanoid C3'H/CYP98A low borderline
Srurcontig_2340115680 Phenylpropanoid C4H/CYP73A low borderline
Srurcontig_2710129680 Phenylpropanoid C4H/CYP73A medium pass
Srurcontig_3150151100 Phenylpropanoid C4H/CYP73A low borderline
Srurcontig_3150151110 Phenylpropanoid C4H/CYP73A low borderline
Srurcontig_3490170930 Phenylpropanoid C4H/CYP73A low borderline
Srurcontig_4110204060 Phenylpropanoid C4H/CYP73A low borderline
Srurcontig_4550226170 Phenylpropanoid C4H/CYP73A low borderline
Srurcontig_4740238410 Phenylpropanoid C4H/CYP73A low borderline
Srurcontig_5020246930 Phenylpropanoid C4H/CYP73A low borderline
Srurcontig_5660288810 Phenylpropanoid C4H/CYP73A medium borderline
Srurcontig_6800344780 Phenylpropanoid C4H/CYP73A low borderline
Srurcontig_7460366310 Phenylpropanoid C4H/CYP73A medium borderline
Srurcontig_7460366330 Phenylpropanoid C4H/CYP73A medium borderline
Srurcontig_8520437340 Phenylpropanoid C4H/CYP73A medium borderline
Srurcontig_9370480550 Phenylpropanoid C4H/CYP73A low borderline
Srurcontig_9870498930 Phenylpropanoid C4H/CYP73A low borderline
Srurcontig_9930501490 Phenylpropanoid C4H/CYP73A low borderline
Srurcontig_10630024620 Phenylpropanoid CAD medium pass
Srurcontig_10910040700 Phenylpropanoid CAD medium borderline
Srurcontig_11120049690 Phenylpropanoid CAD low borderline
Srurcontig_1600079380 Phenylpropanoid CAD medium pass
Srurcontig_1830088440 Phenylpropanoid CAD low borderline
Srurcontig_1900092280 Phenylpropanoid CAD low borderline
Srurcontig_2300114330 Phenylpropanoid CAD low borderline
Srurcontig_2400117070 Phenylpropanoid CAD medium borderline
Srurcontig_2400117660 Phenylpropanoid CAD low borderline
Srurcontig_2690129040 Phenylpropanoid CAD medium borderline
Srurcontig_2690129050 Phenylpropanoid CAD medium borderline
Srurcontig_2930138600 Phenylpropanoid CAD low borderline
Srurcontig_3400165580 Phenylpropanoid CAD medium pass
Srurcontig_3540175360 Phenylpropanoid CAD low borderline