PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_3150151070 Rosmarinic Acid C4H low borderline
Srurcontig_3150151090 Rosmarinic Acid C4H medium pass
Srurcontig_3150151100 Rosmarinic Acid C4H low borderline
Srurcontig_3150151110 Rosmarinic Acid C4H low borderline
Srurcontig_3150151120 Rosmarinic Acid C4H medium pass
Srurcontig_3170151640 Rosmarinic Acid C4H low borderline
Srurcontig_3170151650 Rosmarinic Acid C4H low borderline
Srurcontig_3170151720 Rosmarinic Acid C4H low borderline
Srurcontig_3270157940 Rosmarinic Acid C4H low borderline
Srurcontig_3320159950 Rosmarinic Acid C4H low borderline
Srurcontig_3350163710 Rosmarinic Acid C4H medium pass
Srurcontig_3490169890 Rosmarinic Acid C4H low borderline
Srurcontig_3490170920 Rosmarinic Acid C4H low borderline
Srurcontig_3490170930 Rosmarinic Acid C4H low borderline
Srurcontig_3490170940 Rosmarinic Acid C4H medium pass
Srurcontig_3490170960 Rosmarinic Acid C4H low borderline
Srurcontig_3630177970 Rosmarinic Acid C4H low borderline
Srurcontig_3670178350 Rosmarinic Acid C4H low borderline
Srurcontig_370179740 Rosmarinic Acid C4H low borderline
Srurcontig_370179750 Rosmarinic Acid C4H low borderline
Srurcontig_370179760 Rosmarinic Acid C4H low borderline
Srurcontig_370179770 Rosmarinic Acid C4H low borderline
Srurcontig_370179950 Rosmarinic Acid C4H low borderline
Srurcontig_370180030 Rosmarinic Acid C4H low borderline
Srurcontig_3720182190 Rosmarinic Acid C4H low borderline
Srurcontig_3890187780 Rosmarinic Acid C4H low borderline
Srurcontig_3890187790 Rosmarinic Acid C4H low borderline
Srurcontig_3890189140 Rosmarinic Acid C4H low borderline
Srurcontig_390189600 Rosmarinic Acid C4H medium pass
Srurcontig_390189750 Rosmarinic Acid C4H medium pass
Srurcontig_3910193590 Rosmarinic Acid C4H low borderline
Srurcontig_3910196340 Rosmarinic Acid C4H low borderline
Srurcontig_3910196880 Rosmarinic Acid C4H medium pass
Srurcontig_3910196900 Rosmarinic Acid C4H low borderline
Srurcontig_4070201800 Rosmarinic Acid C4H low borderline
Srurcontig_4110204060 Rosmarinic Acid C4H low borderline
Srurcontig_4190207160 Rosmarinic Acid C4H low borderline
Srurcontig_4220207940 Rosmarinic Acid C4H low borderline
Srurcontig_4220207950 Rosmarinic Acid C4H low borderline
Srurcontig_4320211610 Rosmarinic Acid C4H low borderline
Srurcontig_4360215020 Rosmarinic Acid C4H low borderline
Srurcontig_4390217510 Rosmarinic Acid C4H low borderline
Srurcontig_4430219180 Rosmarinic Acid C4H low borderline
Srurcontig_4490223400 Rosmarinic Acid C4H low borderline
Srurcontig_4500224200 Rosmarinic Acid C4H low borderline
Srurcontig_4550226170 Rosmarinic Acid C4H low borderline
Srurcontig_4570228550 Rosmarinic Acid C4H low borderline
Srurcontig_4610231930 Rosmarinic Acid C4H low borderline
Srurcontig_4680235520 Rosmarinic Acid C4H low borderline
Srurcontig_4720237570 Rosmarinic Acid C4H low borderline