PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_4740238410 Rosmarinic Acid C4H low borderline
Srurcontig_4810239700 Rosmarinic Acid C4H low borderline
Srurcontig_4810239710 Rosmarinic Acid C4H low borderline
Srurcontig_4810239770 Rosmarinic Acid C4H low borderline
Srurcontig_4810239780 Rosmarinic Acid C4H low borderline
Srurcontig_490242270 Rosmarinic Acid C4H low borderline
Srurcontig_4990245790 Rosmarinic Acid C4H low borderline
Srurcontig_4990245800 Rosmarinic Acid C4H low borderline
Srurcontig_5020246930 Rosmarinic Acid C4H low borderline
Srurcontig_5240258390 Rosmarinic Acid C4H low borderline
Srurcontig_5240258440 Rosmarinic Acid C4H low borderline
Srurcontig_5240258460 Rosmarinic Acid C4H low borderline
Srurcontig_5350264050 Rosmarinic Acid C4H low borderline
Srurcontig_5350264420 Rosmarinic Acid C4H low borderline
Srurcontig_5360266860 Rosmarinic Acid C4H low borderline
Srurcontig_5410271050 Rosmarinic Acid C4H low borderline
Srurcontig_5430274840 Rosmarinic Acid C4H low borderline
Srurcontig_5450275410 Rosmarinic Acid C4H low borderline
Srurcontig_5500277490 Rosmarinic Acid C4H medium pass
Srurcontig_5590285780 Rosmarinic Acid C4H low borderline
Srurcontig_5640288600 Rosmarinic Acid C4H low borderline
Srurcontig_5660288810 Rosmarinic Acid C4H low borderline
Srurcontig_5670291090 Rosmarinic Acid C4H low borderline
Srurcontig_5710293950 Rosmarinic Acid C4H low borderline
Srurcontig_5710293980 Rosmarinic Acid C4H low borderline
Srurcontig_5710293990 Rosmarinic Acid C4H low borderline
Srurcontig_5930300800 Rosmarinic Acid C4H medium pass
Srurcontig_600303120 Rosmarinic Acid C4H low borderline
Srurcontig_6070305370 Rosmarinic Acid C4H low borderline
Srurcontig_6080306510 Rosmarinic Acid C4H medium pass
Srurcontig_6120308450 Rosmarinic Acid C4H medium pass
Srurcontig_6290318500 Rosmarinic Acid C4H low borderline
Srurcontig_6290318560 Rosmarinic Acid C4H low borderline
Srurcontig_6290319690 Rosmarinic Acid C4H low borderline
Srurcontig_6580337720 Rosmarinic Acid C4H low borderline
Srurcontig_6580338050 Rosmarinic Acid C4H low borderline
Srurcontig_6610340200 Rosmarinic Acid C4H low borderline
Srurcontig_6800344780 Rosmarinic Acid C4H low borderline
Srurcontig_710353760 Rosmarinic Acid C4H low borderline
Srurcontig_710353850 Rosmarinic Acid C4H medium pass
Srurcontig_7260359310 Rosmarinic Acid C4H low borderline
Srurcontig_7260359320 Rosmarinic Acid C4H low borderline
Srurcontig_7270359400 Rosmarinic Acid C4H low borderline
Srurcontig_7270359450 Rosmarinic Acid C4H medium pass
Srurcontig_7270359470 Rosmarinic Acid C4H medium pass
Srurcontig_730361300 Rosmarinic Acid C4H low borderline
Srurcontig_7400363770 Rosmarinic Acid C4H low borderline
Srurcontig_7460366310 Rosmarinic Acid C4H medium pass
Srurcontig_7460366330 Rosmarinic Acid C4H medium pass
Srurcontig_7550370810 Rosmarinic Acid C4H low borderline