PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_7550371540 Rosmarinic Acid C4H low borderline
Srurcontig_7550372770 Rosmarinic Acid C4H low borderline
Srurcontig_7590386770 Rosmarinic Acid C4H medium pass
Srurcontig_7590387170 Rosmarinic Acid C4H low borderline
Srurcontig_7590387190 Rosmarinic Acid C4H low borderline
Srurcontig_7590387200 Rosmarinic Acid C4H low borderline
Srurcontig_7600389840 Rosmarinic Acid C4H medium pass
Srurcontig_7600389870 Rosmarinic Acid C4H medium pass
Srurcontig_780396850 Rosmarinic Acid C4H low borderline
Srurcontig_780396900 Rosmarinic Acid C4H medium pass
Srurcontig_7830398780 Rosmarinic Acid C4H low borderline
Srurcontig_7830398830 Rosmarinic Acid C4H low borderline
Srurcontig_7870402120 Rosmarinic Acid C4H low borderline
Srurcontig_790403130 Rosmarinic Acid C4H low borderline
Srurcontig_7920405560 Rosmarinic Acid C4H medium pass
Srurcontig_7920405860 Rosmarinic Acid C4H medium pass
Srurcontig_7920405900 Rosmarinic Acid C4H low borderline
Srurcontig_7950407090 Rosmarinic Acid C4H medium pass
Srurcontig_7950407120 Rosmarinic Acid C4H medium pass
Srurcontig_7970407480 Rosmarinic Acid C4H low borderline
Srurcontig_7990407850 Rosmarinic Acid C4H low borderline
Srurcontig_8040411570 Rosmarinic Acid C4H low borderline
Srurcontig_8100415430 Rosmarinic Acid C4H low borderline
Srurcontig_8100415760 Rosmarinic Acid C4H medium pass
Srurcontig_8190420870 Rosmarinic Acid C4H medium pass
Srurcontig_8380427520 Rosmarinic Acid C4H low borderline
Srurcontig_8380427540 Rosmarinic Acid C4H low borderline
Srurcontig_8520437340 Rosmarinic Acid C4H medium pass
Srurcontig_8690447470 Rosmarinic Acid C4H low borderline
Srurcontig_8900455160 Rosmarinic Acid C4H low borderline
Srurcontig_9130467910 Rosmarinic Acid C4H low borderline
Srurcontig_9160472140 Rosmarinic Acid C4H low borderline
Srurcontig_9250475170 Rosmarinic Acid C4H low borderline
Srurcontig_9260475340 Rosmarinic Acid C4H low borderline
Srurcontig_9300478310 Rosmarinic Acid C4H medium pass
Srurcontig_9300478340 Rosmarinic Acid C4H low borderline
Srurcontig_930476190 Rosmarinic Acid C4H low borderline
Srurcontig_930476900 Rosmarinic Acid C4H low borderline
Srurcontig_9370480550 Rosmarinic Acid C4H low borderline
Srurcontig_950483620 Rosmarinic Acid C4H low borderline
Srurcontig_9540484520 Rosmarinic Acid C4H low borderline
Srurcontig_9540484530 Rosmarinic Acid C4H low borderline
Srurcontig_9540484540 Rosmarinic Acid C4H low borderline
Srurcontig_9670488630 Rosmarinic Acid C4H medium pass
Srurcontig_9700491570 Rosmarinic Acid C4H medium pass
Srurcontig_9800496680 Rosmarinic Acid C4H low borderline
Srurcontig_9870498930 Rosmarinic Acid C4H low borderline
Srurcontig_9870498940 Rosmarinic Acid C4H low borderline
Srurcontig_9870499020 Rosmarinic Acid C4H low borderline
Srurcontig_9870499420 Rosmarinic Acid C4H medium pass