PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1236
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Srurcontig_7590386770 Steroid DWF4/CYP90B1 low borderline
Srurcontig_7590387170 Steroid DWF4/CYP90B1 low borderline
Srurcontig_7590387190 Steroid DWF4/CYP90B1 low borderline
Srurcontig_7590387200 Steroid DWF4/CYP90B1 low borderline
Srurcontig_7830398780 Steroid DWF4/CYP90B1 low borderline
Srurcontig_7830398830 Steroid DWF4/CYP90B1 low borderline
Srurcontig_7850399230 Steroid DWF4/CYP90B1 low borderline
Srurcontig_790403130 Steroid DWF4/CYP90B1 low borderline
Srurcontig_8380427520 Steroid DWF4/CYP90B1 low borderline
Srurcontig_8380427540 Steroid DWF4/CYP90B1 low borderline
Srurcontig_8900455160 Steroid DWF4/CYP90B1 low borderline
Srurcontig_9160472010 Steroid DWF4/CYP90B1 low borderline
Srurcontig_9250475170 Steroid DWF4/CYP90B1 low borderline
Srurcontig_9260475340 Steroid DWF4/CYP90B1 low borderline
Srurcontig_9540484520 Steroid DWF4/CYP90B1 medium borderline
Srurcontig_9540484530 Steroid DWF4/CYP90B1 medium borderline
Srurcontig_9540484540 Steroid DWF4/CYP90B1 medium borderline
Srurcontig_9870499420 Steroid DWF4/CYP90B1 low borderline
Srurcontig_9980504260 Steroid DWF4/CYP90B1 low borderline
Srurcontig_6580338220 Steroid DWF5 medium pass
Srurcontig_7480366810 Steroid DWF5 medium pass
Srurcontig_790402950 Steroid DWF5 medium pass
Srurcontig_860443890 Steroid DWF5 medium pass
Srurcontig_480239450 Steroid DWF7 medium pass
Srurcontig_7800398000 Steroid DWF7 medium pass
Srurcontig_860442470 Steroid FK high pass
Srurcontig_1060023790 Steroid HYD1 low borderline
Srurcontig_3050144070 Steroid HYD1 high pass
Srurcontig_8770449700 Steroid HYD1 low borderline
Srurcontig_10320017110 Steroid ROT3/CYP90C1 low borderline
Srurcontig_10850038310 Steroid ROT3/CYP90C1 low borderline
Srurcontig_2430120430 Steroid ROT3/CYP90C1 low borderline
Srurcontig_6610340200 Steroid ROT3/CYP90C1 low borderline
Srurcontig_5720295590 Steroid SMO1/SMO2 medium pass
Srurcontig_7140356010 Steroid SMO1/SMO2 medium pass
Srurcontig_8710448020 Steroid SMO1/SMO2 medium pass
Srurcontig_10910041040 Steroid SMT1/SMT2/SMT3 medium pass
Srurcontig_10950042120 Steroid SMT1/SMT2/SMT3 medium pass
Srurcontig_11110049230 Steroid SMT1/SMT2/SMT3 medium pass
Srurcontig_1170062200 Steroid SMT1/SMT2/SMT3 low borderline
Srurcontig_1900092070 Steroid SMT1/SMT2/SMT3 medium pass
Srurcontig_2900137100 Steroid SMT1/SMT2/SMT3 low borderline
Srurcontig_3350164340 Steroid SMT1/SMT2/SMT3 low borderline
Srurcontig_3420166720 Steroid SMT1/SMT2/SMT3 low borderline
Srurcontig_3520173370 Steroid SMT1/SMT2/SMT3 low borderline
Srurcontig_3520173780 Steroid SMT1/SMT2/SMT3 medium pass
Srurcontig_3540175400 Steroid SMT1/SMT2/SMT3 low borderline
Srurcontig_4450219910 Steroid SMT1/SMT2/SMT3 low borderline
Srurcontig_5470276790 Steroid SMT1/SMT2/SMT3 medium pass
Srurcontig_5720294700 Steroid SMT1/SMT2/SMT3 low borderline