PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1236
Family-Level Assignments
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Srurcontig_5820297940 Steroid SMT1/SMT2/SMT3 low borderline
Srurcontig_6390327220 Steroid SMT1/SMT2/SMT3 medium pass
Srurcontig_6390327350 Steroid SMT1/SMT2/SMT3 low borderline
Srurcontig_7220358490 Steroid SMT1/SMT2/SMT3 medium pass
Srurcontig_7560377840 Steroid SMT1/SMT2/SMT3 medium pass
Srurcontig_7580381640 Steroid SMT1/SMT2/SMT3 low borderline
Srurcontig_7580381740 Steroid SMT1/SMT2/SMT3 medium pass
Srurcontig_7780395420 Steroid SMT1/SMT2/SMT3 medium pass
Srurcontig_7790395490 Steroid SMT1/SMT2/SMT3 medium pass
Srurcontig_8040412030 Steroid SMT1/SMT2/SMT3 low borderline
Srurcontig_8480433330 Steroid SMT1/SMT2/SMT3 low borderline
Srurcontig_8550439750 Steroid SMT1/SMT2/SMT3 low borderline
Srurcontig_8640445720 Steroid SMT1/SMT2/SMT3 medium pass
Srurcontig_8650446040 Steroid SMT1/SMT2/SMT3 low borderline
Srurcontig_8880454250 Steroid SMT1/SMT2/SMT3 low borderline
Srurcontig_970491290 Steroid SMT1/SMT2/SMT3 low borderline
Srurcontig_9760492820 Steroid SMT1/SMT2/SMT3 medium pass
Srurcontig_2560126060 Steroid SQE medium pass
Srurcontig_3010142880 Steroid SQE low borderline
Srurcontig_3430168320 Steroid SQE low borderline
Srurcontig_5330262630 Steroid SQE medium pass
Srurcontig_5330262640 Steroid SQE low borderline
Srurcontig_6460329940 Steroid SQE medium pass
Srurcontig_9680488930 Steroid SQE medium pass
Srurcontig_9760493090 Steroid SQE low borderline
Srurcontig_1610079940 Steroid SQS/FDFT1 low borderline
Srurcontig_1830086730 Steroid SQS/FDFT1 low borderline
Srurcontig_1880089870 Steroid SQS/FDFT1 low borderline
Srurcontig_2530123730 Steroid SQS/FDFT1 medium pass
Srurcontig_2530123740 Steroid SQS/FDFT1 medium pass
Srurcontig_2560125590 Steroid SQS/FDFT1 medium pass
Srurcontig_3080147950 Steroid SQS/FDFT1 medium pass
Srurcontig_4100203400 Steroid SQS/FDFT1 low borderline
Srurcontig_4690235590 Steroid SQS/FDFT1 medium pass
Srurcontig_4690235600 Steroid SQS/FDFT1 medium pass
Srurcontig_5530282770 Steroid SQS/FDFT1 low borderline
Srurcontig_6520334050 Steroid SQS/FDFT1 high pass
Srurcontig_7570379180 Steroid SQS/FDFT1 high pass
Srurcontig_7590385090 Steroid SQS/FDFT1 high pass
Srurcontig_9130468640 Steroid SQS/FDFT1 low borderline