PlantSME Plant secondary metabolism enzyme database

Amphicarpaea edgeworthii (amphicarpaea_edgeworthii)

Imported from atlas release summary for Amphicarpaea edgeworthii.

1777
Candidate Protein Records
1419
Pathway-Level Records
3845
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 419 19 BAHD (145) View species results
Phenylpropanoid pathway 304 12 POD (130) View species results
Alkaloid pathway 292 23 NMT (50) View species results
Flavonoid pathway 171 11 UFGT (86) View species results
Rosmarinic acid pathway 127 7 C4H (66) View species results
Steroid pathway 106 12 CAS (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1634 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
AedgHiC_scaffold_70218570 Terpenoid GGPPS medium borderline
AedgHiC_scaffold_60190050 Terpenoid GPPS medium borderline
AedgHiC_scaffold_30109000 Terpenoid HDR/IspH high pass
AedgHiC_scaffold_70212700 Terpenoid HDR/IspH low borderline
AedgHiC_scaffold_10013310 Terpenoid HDS/IspG high pass
AedgHiC_scaffold_110066420 Terpenoid HMGR medium pass
AedgHiC_scaffold_30125490 Terpenoid HMGR medium pass
AedgHiC_scaffold_60197560 Terpenoid HMGR low borderline
AedgHiC_scaffold_70221940 Terpenoid HMGR medium pass
AedgHiC_scaffold_110072250 Terpenoid HMGS high pass
AedgHiC_scaffold_60187090 Terpenoid HMGS high pass
AedgHiC_scaffold_70213890 Terpenoid HMGS high pass
AedgHiC_scaffold_30107820 Terpenoid IDI medium pass
AedgHiC_scaffold_80246780 Terpenoid IDI medium pass
AedgHiC_scaffold_100054660 Terpenoid MCT/IspD low borderline
AedgHiC_scaffold_60208580 Terpenoid MCT/IspD high pass
AedgHiC_scaffold_80235130 Terpenoid MCT/IspD low borderline
AedgHiC_scaffold_110072790 Terpenoid MDS/IspF high pass
AedgHiC_scaffold_10017560 Terpenoid MVD low borderline
AedgHiC_scaffold_10019990 Terpenoid MVD medium pass
AedgHiC_scaffold_10020040 Terpenoid MVD low borderline
AedgHiC_scaffold_20075750 Terpenoid MVD low borderline
AedgHiC_scaffold_70221460 Terpenoid MVD medium borderline
AedgHiC_scaffold_10023980 Terpenoid MVK low borderline
AedgHiC_scaffold_20090570 Terpenoid MVK low borderline
AedgHiC_scaffold_20099930 Terpenoid MVK medium pass
AedgHiC_scaffold_30129450 Terpenoid MVK low borderline
AedgHiC_scaffold_60205460 Terpenoid MVK low borderline
AedgHiC_scaffold_100037980 Terpenoid PMK medium pass
AedgHiC_scaffold_100041810 Terpenoid TPS low borderline
AedgHiC_scaffold_10004570 Terpenoid TPS medium pass
AedgHiC_scaffold_10004580 Terpenoid TPS medium pass
AedgHiC_scaffold_100048880 Terpenoid TPS medium pass
AedgHiC_scaffold_100052980 Terpenoid TPS medium pass
AedgHiC_scaffold_100052990 Terpenoid TPS low borderline
AedgHiC_scaffold_100053520 Terpenoid TPS low borderline
AedgHiC_scaffold_100053530 Terpenoid TPS medium pass
AedgHiC_scaffold_10008830 Terpenoid TPS medium pass
AedgHiC_scaffold_10008950 Terpenoid TPS medium pass
AedgHiC_scaffold_10008960 Terpenoid TPS medium pass
AedgHiC_scaffold_10008970 Terpenoid TPS medium pass
AedgHiC_scaffold_10010970 Terpenoid TPS medium pass
AedgHiC_scaffold_10010980 Terpenoid TPS low borderline
AedgHiC_scaffold_10012730 Terpenoid TPS low borderline
AedgHiC_scaffold_110064160 Terpenoid TPS medium pass
AedgHiC_scaffold_110064190 Terpenoid TPS medium pass
AedgHiC_scaffold_110065200 Terpenoid TPS medium pass
AedgHiC_scaffold_40132100 Terpenoid TPS medium pass
AedgHiC_scaffold_40132120 Terpenoid TPS medium pass
AedgHiC_scaffold_40132130 Terpenoid TPS medium pass