PlantSME Plant secondary metabolism enzyme database

Amphicarpaea edgeworthii (amphicarpaea_edgeworthii)

Imported from atlas release summary for Amphicarpaea edgeworthii.

1419
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 419 19 BAHD (145) View species results
Phenylpropanoid pathway 304 12 POD (130) View species results
Alkaloid pathway 292 23 NMT (50) View species results
Flavonoid pathway 171 11 UFGT (86) View species results
Rosmarinic acid pathway 127 7 C4H (66) View species results
Steroid pathway 106 12 CAS (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1634 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
AedgHiC_scaffold_30127270 Steroid CYP90D1 medium borderline
AedgHiC_scaffold_40142430 Steroid CYP90D1 low borderline
AedgHiC_scaffold_40148000 Steroid CYP90D1 low borderline
AedgHiC_scaffold_50157860 Steroid CYP90D1 low borderline
AedgHiC_scaffold_50181080 Steroid CYP90D1 low borderline
AedgHiC_scaffold_50181090 Steroid CYP90D1 low borderline
AedgHiC_scaffold_60196430 Steroid CYP90D1 low borderline
AedgHiC_scaffold_60196480 Steroid CYP90D1 low borderline
AedgHiC_scaffold_60196490 Steroid CYP90D1 low borderline
AedgHiC_scaffold_70210580 Steroid CYP90D1 low borderline
AedgHiC_scaffold_70214320 Steroid CYP90D1 low borderline
AedgHiC_scaffold_70214340 Steroid CYP90D1 low borderline
AedgHiC_scaffold_70218730 Steroid CYP90D1 medium borderline
AedgHiC_scaffold_70219080 Steroid CYP90D1 low borderline
AedgHiC_scaffold_70220910 Steroid CYP90D1 low borderline
AedgHiC_scaffold_70229380 Steroid CYP90D1 medium borderline
AedgHiC_scaffold_80248550 Steroid CYP90D1 low borderline
AedgHiC_scaffold_80248560 Steroid CYP90D1 low borderline
AedgHiC_scaffold_80248580 Steroid CYP90D1 low borderline
AedgHiC_scaffold_90266090 Steroid CYP90D1 medium borderline
AedgHiC_scaffold_90271560 Steroid CYP90D1 low borderline
AedgHiC_scaffold_90274060 Steroid CYP90D1 low borderline
AedgHiC_scaffold_90278720 Steroid CYP90D1 low borderline
AedgHiC_scaffold_110070340 Steroid DET2 low borderline
AedgHiC_scaffold_30125510 Steroid DET2 low borderline
AedgHiC_scaffold_50182180 Steroid DET2 medium borderline
AedgHiC_scaffold_70216040 Steroid DET2 low borderline
AedgHiC_scaffold_70216050 Steroid DET2 medium pass
AedgHiC_scaffold_90276300 Steroid DET2 medium pass
AedgHiC_scaffold_50158630 Steroid DWF1 medium pass
AedgHiC_scaffold_100039070 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_100042340 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_100044780 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_100045900 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_100047660 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_100048160 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_100048180 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_100048540 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_10004930 Steroid DWF4/CYP90B1 medium borderline
AedgHiC_scaffold_10004940 Steroid DWF4/CYP90B1 medium borderline
AedgHiC_scaffold_100050230 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_100050240 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_100050510 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_10006350 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_10006360 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_10006370 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_10006400 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_10008080 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_10008090 Steroid DWF4/CYP90B1 low borderline
AedgHiC_scaffold_10008980 Steroid DWF4/CYP90B1 low borderline