PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

2799
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ANS/LDOX
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Gene Pathway Family Confidence Status Best Target
ara_suecica_KAG7547269.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00003__sp_O04274_LDOX_PERFR
ara_suecica_KAG7565133.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7573604.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7584415.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7590582.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7595564.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00002__sp_A2WQ39_ANS1_ORYSI
ara_suecica_KAG7596978.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7598700.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7598701.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7599756.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7600143.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7621453.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00005__sp_Q96323_LDOX_ARATH
ara_suecica_KAG7621738.1 Flavonoid ANS/LDOX medium pass ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7631566.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7641336.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7643094.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7652807.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00002__sp_A2WQ39_ANS1_ORYSI
ara_suecica_KAG7654235.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7654236.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7655910.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7655911.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7656788.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7657097.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
ara_suecica_KAG7660248.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH