PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

2799
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPD/CYP90A1
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Gene Pathway Family Confidence Status
ara_suecica_KAG7537563.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7537616.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7539046.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7544732.1 Steroid CPD/CYP90A1 medium borderline
ara_suecica_KAG7544736.1 Steroid CPD/CYP90A1 medium borderline
ara_suecica_KAG7548168.1 Steroid CPD/CYP90A1 medium borderline
ara_suecica_KAG7554395.1 Steroid CPD/CYP90A1 medium borderline
ara_suecica_KAG7563586.1 Steroid CPD/CYP90A1 medium borderline
ara_suecica_KAG7564915.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7565496.1 Steroid CPD/CYP90A1 medium borderline
ara_suecica_KAG7565515.1 Steroid CPD/CYP90A1 medium borderline
ara_suecica_KAG7571863.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7588910.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7596779.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7597411.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7599702.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7610900.1 Steroid CPD/CYP90A1 medium borderline
ara_suecica_KAG7610901.1 Steroid CPD/CYP90A1 medium borderline
ara_suecica_KAG7610903.1 Steroid CPD/CYP90A1 medium borderline
ara_suecica_KAG7612668.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7612718.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7614052.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7623219.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7623462.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7632617.1 Steroid CPD/CYP90A1 medium borderline
ara_suecica_KAG7633708.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7634228.1 Steroid CPD/CYP90A1 medium borderline
ara_suecica_KAG7634247.1 Steroid CPD/CYP90A1 medium borderline
ara_suecica_KAG7634248.1 Steroid CPD/CYP90A1 medium borderline
ara_suecica_KAG7634250.1 Steroid CPD/CYP90A1 medium borderline
ara_suecica_KAG7654023.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7654670.1 Steroid CPD/CYP90A1 low borderline
ara_suecica_KAG7657773.1 Steroid CPD/CYP90A1 medium borderline
ara_suecica_KAG7658464.1 Steroid CPD/CYP90A1 medium borderline